RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 H1FNTQ75WM6 255 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 ABI3BPQ7Z7G0 1075 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 POGLUT1Q8NBL1 392 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR2T35Q8NGX2 323 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 IFI44Q8TCB0 444 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF775Q96BV0 537 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 MAB21L2Q9Y586 359 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 A0A0G2JMZ2 1700 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 A0A1W2PQF6 199 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 M0R082 166 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 TCN2P20062 427 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 CLDN17P56750 224 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 TATDN3Q17R31 274 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 NKPD1Q17RQ9 610 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 GLYR1Q49A26 553 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 XAF1Q6GPH4 301 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 UBE3DQ7Z6J8 389 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 RPS19BP1Q86WX3 136 aaKnown RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 LYSMD2Q8IV50 215 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF615Q8N8J6 731 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 LGALS14Q8TCE9 139 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 CCDC120Q96HB5 630 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF442Q9H7R0 627 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 VSX1Q9NZR4 365 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 CHRNA9Q9UGM1 479 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 RPL27P61353 136 aaKnown RBP10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 YIF1BQ5BJH7 314 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 C6orf183Q5T699 404 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 METTL11BQ5VVY1 283 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 TMEM71Q6P5X7 295 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 FBXO8Q9NRD0 319 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 HMX3A6NHT5 357 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR6C76A6NM76 312 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 FTCDNL1E5RQL4 147 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 ARPC1BO15143 372 aaKnown RBP10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 SPI1P17947 270 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 DIO1P49895 249 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 PPP1CAP62136 330 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 VAMP2P63027 116 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 ARG2P78540 354 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF628Q5EBL2 1059 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 C12orf73Q69YU5 71 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 SMRP1Q8NCR6 262 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 C8orf44Q96CB5 159 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 LRFN5Q96NI6 719 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 HCAR1Q9BXC0 346 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR10A2Q9H208 303 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC6A15Q9H2J7 730 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 IL20Q9NYY1 176 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 GPR55Q9Y2T6 319 aaPredicted RBP10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 RALGAPA2Q2PPJ7 1873 aa10.46□□□□□ -0.73
PCDHGC3-201ENST00000308177 MEIS3P1A6NDR6 274 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZNF850A8MQ14 1090 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZNF736B4DX44 427 aaPredicted RBP10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 NUDT21O43809 227 aaKnown RBP10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 DNAJB6O75190 326 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 EXT1Q16394 746 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 LIPNQ5VXI9 398 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 LINC00346Q8IVM7 164 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 BORCS8Q96FH0 119 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 OR51J1Q9H342 316 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 FGF20Q9NP95 211 aaPredicted RBP10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 ISYNA1Q9NPH2 558 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 BRWD1Q9NSI6 2320 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 RBFOX1Q9NWB1 397 aaKnown RBP10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 RCE1Q9Y256 329 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 IGHV5-51A0A0C4DH38 117 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 HTR3BO95264 441 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 EML2O95834 649 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 MT-ND4P03905 459 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 SDHAP31040 664 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 APOBEC1P41238 236 aaKnown RBP10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 NR4A2P43354 598 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 CTF1Q16619 201 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 UBE2NLQ5JXB2 153 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 BEST3Q8N1M1 668 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 DNAJC5GQ8N7S2 189 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 OR51T1Q8NGJ9 327 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 LRRC20Q8TCA0 184 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 FAM60AQ9NP50 221 aa10.46□□□□□ -0.74
PCDHGC3-201ENST00000308177 PIKFYVEQ9Y2I7 2098 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 FRG2CA6NGY1 282 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 PRAF2O60831 178 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 UBL3O95164 117 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZGLP1P0C6A0 271 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 AKR1C4P17516 323 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 PNLIPRP2P54317 469 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 TPBGQ13641 420 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 PLEKHN1Q494U1 663 aaPredicted RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 MRM1Q6IN84 353 aaKnown RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 OR5H2Q8NGV7 314 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZNF471Q9BX82 626 aaPredicted RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 SEMA4CQ9C0C4 833 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 RDH8Q9NYR8 311 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 I3L521 148 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 AKAIN1P0CW23 69 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 THBS2P35442 1172 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 HCCSP53701 268 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 RPL18Q07020 188 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms