RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 NUDT21O43809 227 aaKnown RBP11.88□□□□□ -0.51
COL3A1-201ENST00000304636 PRKRAO75569 313 aaKnown RBP11.88□□□□□ -0.51
COL3A1-201ENST00000304636 ITGB2P05107 769 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 LCN6P62502 163 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 RPP30P78346 268 aaKnown RBP11.88□□□□□ -0.51
COL3A1-201ENST00000304636 POU3F1Q03052 451 aaPredicted RBP11.88□□□□□ -0.51
COL3A1-201ENST00000304636 TPBGQ13641 420 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 SOHLH1Q5JUK2 328 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 ABHD17CQ6PCB6 329 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 USP53Q70EK8 1073 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 RTL10Q7L3V2 364 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 NLRC3Q7RTR2 1065 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 NKAIN4Q8IVV8 208 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 RSPRY1Q96DX4 576 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 CMSS1Q9BQ75 279 aaKnown RBP11.88□□□□□ -0.51
COL3A1-201ENST00000304636 ARHGAP9Q9BRR9 750 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 RHNO1Q9BSD3 238 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 CROCCQ5TZA2 2017 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 AGAP14A8MT82 685 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 H0YGG7 62 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 B3GALT4O96024 378 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 TPOP07202 933 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 HIST2H3PS2Q5TEC6 136 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 METTL9Q9H1A3 318 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 PDFQ9HBH1 243 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 LRP5O75197 1615 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 MSTNO14793 375 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 B4GALT3O60512 393 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 P04436 131 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 HBQ1P09105 142 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 SPI1P17947 270 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 POU3F3P20264 500 aaPredicted RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 HTD2P86397 168 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 CTBSQ01459 385 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 TLE4Q04727 773 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 MELKQ14680 651 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF620Q6ZNG0 422 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 BTLAQ7Z6A9 289 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 IL23AQ9NPF7 189 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 GPR55Q9Y2T6 319 aaPredicted RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 LPLP06858 475 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 CD14P08571 375 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 PRR35P0CG20 571 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 TACR3P29371 465 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 CSNK1G2P78368 415 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 CD300LGQ6UXG3 332 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 ADAMTSL4Q6UY14 1074 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 TMEM99Q8N816 258 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 OR13C9Q8NGT0 318 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 YIPF5Q969M3 257 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 LIN37Q96GY3 246 aaPredicted RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 SPNS1Q9H2V7 528 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 C1orf198Q9H425 327 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 EXOSC3Q9NQT5 275 aaKnown RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 TMEFF2Q9UIK5 374 aaPredicted RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 PRPH2P23942 346 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 ATP1B3P54709 279 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 PER3P56645 1201 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 IHHQ14623 411 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 TOR2AQ5JU69 321 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 GLYATL3Q5SZD4 288 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 PAPD4Q6PIY7 484 aaKnown RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 MRPL41Q8IXM3 137 aaKnown RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 BBS1Q8NFJ9 593 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 FAM213BQ8TBF2 198 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 UCN3Q969E3 161 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 PDCD1LG2Q9BQ51 273 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 FGF20Q9NP95 211 aaPredicted RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 SLC22A11Q9NSA0 550 aa11.87□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF629Q9UEG4 869 aaPredicted RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 MRPS28Q9Y2Q9 187 aaKnown RBP11.87□□□□□ -0.51
COL3A1-201ENST00000304636 SLC5A10A0PJK1 596 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 PRSS44E7EML9 344 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 IMPA2O14732 288 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 SELENOFO60613 162 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 RGS11O94810 467 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 F3P13726 295 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 CEBPBP17676 345 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 EPHA2P29317 976 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 MRPL19P49406 292 aaKnown RBP11.86□□□□□ -0.51
COL3A1-201ENST00000304636 ZBTB37Q5TC79 503 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 Q6ZSR6 202 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 OLIG3Q7RTU3 272 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 SELENOIQ9C0D9 397 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 NXF5Q9H1B4 397 aaKnown RBP11.86□□□□□ -0.51
COL3A1-201ENST00000304636 KPTNQ9Y664 436 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 PVRP15151 417 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF28P17035 718 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 ECI1P42126 302 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 KIR2DL3P43628 341 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF385BQ569K4 471 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 LRFN5Q96NI6 719 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 SCPEP1Q9HB40 452 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 HINT3Q9NQE9 182 aaKnown RBP11.86□□□□□ -0.51
COL3A1-201ENST00000304636 COL22A1Q8NFW1 1626 aaPredicted RBP11.86□□□□□ -0.51
COL3A1-201ENST00000304636 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.86□□□□□ -0.51
COL3A1-201ENST00000304636 A0A1B0GUH1 482 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms