RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 ABTB1Q969K4 478 aaPredicted RBP18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 NMNAT3Q96T66 252 aa18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 NAA11Q9BSU3 229 aaPredicted RBP18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 MFRPQ9BY79 579 aa18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 TIGARQ9NQ88 270 aa18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 B3GAT1Q9P2W7 334 aa18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 TP53TG5Q9Y2B4 290 aa18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 NOX1Q9Y5S8 564 aa18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 LIPGQ9Y5X9 500 aa18.56■□□□□ 0.56
PACSIN3-201ENST00000298838 EFCAB10A6NFE3 127 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 ZNF814B7Z6K7 855 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 NPIPA5E9PKD4 350 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 DBTP11182 482 aaKnown RBP18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 HLA-DOBP13765 273 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 AGFG1P52594 562 aaKnown RBP18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 CLDN18P56856 261 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 BCL2A1Q16548 175 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 MESTQ5EB52 335 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 NIPAL3Q6P499 406 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 ZNF773Q6PK81 442 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 GPAT4Q86UL3 456 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 UEVLDQ8IX04 471 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 MEIOBQ8N635 442 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 NPEPL1Q8NDH3 523 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 BBS1Q8NFJ9 593 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 SGCDQ92629 289 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 GGHQ92820 318 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 COPS4Q9BT78 406 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 SRXN1Q9BYN0 137 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 CNOT2Q9NZN8 540 aaKnown RBP18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 NPIPA1Q9UND3 350 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 RASD1Q9Y272 281 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 DNAJC13O75165 2243 aa18.55■□□□□ 0.56
PACSIN3-201ENST00000298838 VAMP5O95183 116 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 IFNGR1P15260 489 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 TUBA4AP68366 448 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 LEG1Q6P5S2 330 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 ADCK1Q86TW2 530 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 PTP4A1Q93096 173 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 MYDGFQ969H8 173 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 OXGR1Q96P68 337 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 HCAR1Q9BXC0 346 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 MED20Q9H944 212 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 FKBP14Q9NWM8 211 aa18.54■□□□□ 0.56
PACSIN3-201ENST00000298838 LOC102725191A0A1B0GVB3 256 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 RGS10O43665 173 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 CXCL13O43927 109 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 BCL10O95999 233 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 CLPTM1O96005 669 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 IGHG3P01860 377 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 PIPP12273 146 aaPredicted RBP18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 HTR1FP30939 366 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 ACVR1BP36896 505 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 CDKN2AP42771 156 aaKnown RBP18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 SLC15A1P46059 708 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 MTNR1AP48039 350 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 CLDN15P56746 228 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 BLMHQ13867 455 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 C1DQ13901 141 aaKnown RBP18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 INAQ16352 499 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 VASNQ6EMK4 673 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 SLC35D2Q76EJ3 337 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 ZNF519Q8TB69 540 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 CPNE4Q96A23 557 aaPredicted RBP18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 TMEM8BA6NDV4 472 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 HTR1AP08908 422 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 KLK2P20151 261 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 ENPP1P22413 925 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 SRYQ05066 204 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 PIGFQ07326 219 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 MELKQ14680 651 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 KLHL12Q53G59 568 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 ARMC4Q5T2S8 1044 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 FAM205BPQ63HN1 556 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 RPUSD3Q6P087 351 aaKnown RBP18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 GHDCQ8N2G8 530 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 ZPLD1Q8TCW7 415 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 TAAR6Q96RI8 345 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 UCN2Q96RP3 112 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 DDOQ99489 341 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 CCDC90BQ9GZT6 254 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 TSPAN10Q9H1Z9 355 aaPredicted RBP18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 OR51V1Q9H2C8 321 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 SNX5Q9Y5X3 404 aa18.53■□□□□ 0.56
PACSIN3-201ENST00000298838 IGHV3-15A0A0B4J1V0 119 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 OR6C68A6NDL8 312 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 A6NIZ1 184 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 SLC22A31A6NKX4 558 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 SMAD9O15198 467 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 ARHGEF9O43307 516 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 MRPS14O60783 128 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 RAMP1O60894 148 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 RENP00797 406 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 ZNF43P17038 809 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 SLC16A1P53985 500 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 RAP1BP61224 184 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 RPS3AP61247 264 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 RPS7P62081 194 aaKnown RBP18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 RAP1AP62834 184 aa18.52■□□□□ 0.56
PACSIN3-201ENST00000298838 MEPCEQ7L2J0 689 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms