RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 SLC19A3Q9BZV2 496 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 ENKD1Q9H0I2 346 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 ANKRD19PQ9H560 264 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 ARMC1Q9NVT9 282 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 TAS2R5Q9NYW4 299 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 KLHL13Q9P2N7 655 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 CLEC4AQ9UMR7 237 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 AURKCQ9UQB9 309 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 RNF6Q9Y252 685 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 TRAPPC4Q9Y296 219 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 ZNF175Q9Y473 711 aa5.24□□□□□ -1.57
SSX3-201ENST00000298396 SPIN1Q9Y657 262 aaPredicted RBP5.24□□□□□ -1.57
SSX3-201ENST00000298396 CHD3Q12873 2000 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 IGKV3D-15A0A087WSY6 115 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 TRAV27A0A087WT01 109 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 A0A1W2PNV4 684 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 TMEM82A0PJX8 343 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 WIPF3A6NGB9 483 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 GJE1A6NN92 205 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 J3QKU1 62 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 TNFRSF11BO00300 401 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 PLPP3O14495 311 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 CLOCKO15516 846 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 DNPH1O43598 174 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 TRAF3IP2O43734 574 aaPredicted RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 ZG16O60844 167 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 SS18L1O75177 396 aaPredicted RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 PTP4A3O75365 173 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 RCBTB2O95199 551 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 GADD45GO95257 159 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 AHSA1O95433 338 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 CST1P01037 141 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 CGAP01215 116 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 IGFBP1P08833 259 aaPredicted RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 HOXD4P09016 255 aaPredicted RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 IFI30P13284 250 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 ITGA2P17301 1181 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 FKBP2P26885 142 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 AGTR1P30556 359 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 PTGER4P35408 488 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 GSSP48637 474 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 SLC16A1P53985 500 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 RPS3AP61247 264 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 RPS4XP62701 263 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 CSNK2A1P68400 391 aaPredicted RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 LGALS3BPQ08380 585 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 IKZF1Q13422 519 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 SLC17A1Q14916 467 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 ATP6AP1Q15904 470 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 OTUD3Q5T2D3 398 aaPredicted RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 RIPPLY2Q5TAB7 128 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 PAQR6Q6TCH4 344 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 C5orf46Q6UWT4 87 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 ZNF730Q6ZMV8 503 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 NUFIP2Q7Z417 695 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 AMIGO2Q86SJ2 522 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 CYP4Z1Q86W10 505 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 KIF18BQ86Y91 864 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 TUSC5Q8IXB3 177 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 KDM8Q8N371 416 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 Q8N3U1 123 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 ADPRHL1Q8NDY3 354 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 BVESQ8NE79 360 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 OR13C2Q8NGS9 318 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 OR5J2Q8NH18 312 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 MOSPD2Q8NHP6 518 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 ITLN2Q8WWU7 325 aaPredicted RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 INTS12Q96CB8 462 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 SLC25A36Q96CQ1 311 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 STARD4Q96DR4 205 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 BPIFA2Q96DR5 249 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 SGTBQ96EQ0 304 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 HS6ST2Q96MM7 605 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 ZNF385AQ96PM9 386 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 RAB3IPQ96QF0 476 aaPredicted RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 ZNF347Q96SE7 839 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 EPYCQ99645 322 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 PKP2Q99959 881 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 KRTAP9-2Q9BYQ4 174 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 FKRPQ9H9S5 495 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 BCO1Q9HAY6 547 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 MCCC2Q9HCC0 563 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 S100A14Q9HCY8 104 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 CHST11Q9NPF2 352 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 MBNL3Q9NUK0 354 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 C19orf73Q9NVV2 129 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 MRPL39Q9NYK5 338 aaKnown RBP5.23□□□□□ -1.57
SSX3-201ENST00000298396 SELENONQ9NZV5 590 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 ZNF229Q9UJW7 825 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 AP4S1Q9Y587 144 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 FLVCR1Q9Y5Y0 555 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 U3KQV3 271 aa5.23□□□□□ -1.57
SSX3-201ENST00000298396 MCIDASD6RGH6 385 aa5.22□□□□□ -1.57
SSX3-201ENST00000298396 OR2T1O43869 369 aa5.22□□□□□ -1.57
SSX3-201ENST00000298396 ZNF432O94892 652 aa5.22□□□□□ -1.57
SSX3-201ENST00000298396 SYNGR4O95473 234 aa5.22□□□□□ -1.57
SSX3-201ENST00000298396 STAMBPO95630 424 aa5.22□□□□□ -1.57
SSX3-201ENST00000298396 MT-ATP6P00846 226 aa5.22□□□□□ -1.57
SSX3-201ENST00000298396 GASTP01350 101 aa5.22□□□□□ -1.57
SSX3-201ENST00000298396 TMIGD3P0DMS9 266 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms