RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 OR2T4Q8NH00 348 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 OR5J2Q8NH18 312 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 CT55Q8WUE5 264 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 ASB15Q8WXK1 588 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 THAP4Q8WY91 577 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 ST8SIA1Q92185 356 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 RASL10BQ96S79 203 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 DEFB126Q9BYW3 111 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SP140LQ9H930 580 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 KLRF1Q9NZS2 232 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 TCFL5Q9UL49 500 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 TRAPPC4Q9Y296 219 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 TMEM72A0PK05 275 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 FUOMA2VDF0 154 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SMIM30A4D0T7 59 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 XKRYO14609 159 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SELENOFO60613 162 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SERPINA3P01011 423 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SNTA1Q13424 505 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 INSL4Q14641 139 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SSPNQ14714 243 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SGCBQ16585 318 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 CDONQ4KMG0 1287 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 DMKNQ6E0U4 476 aaPredicted RBP8.27□□□□□ -1.09
PDPN-201ENST00000294489 OR5M10Q6IEU7 315 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 MZT2AQ6P582 158 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 FAM83FQ8NEG4 500 aaPredicted RBP8.27□□□□□ -1.09
PDPN-201ENST00000294489 SPACA9Q96E40 222 aaPredicted RBP8.27□□□□□ -1.09
PDPN-201ENST00000294489 DIRAS2Q96HU8 199 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 TSPAN32Q96QS1 320 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 PTDSS2Q9BVG9 487 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SDHAF3Q9NRP4 125 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 TRIM3O75382 744 aaPredicted RBP8.26□□□□□ -1.09
PDPN-201ENST00000294489 OR2J2O76002 312 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 WISP1O95388 367 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 AHCYP23526 432 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 MYL9P24844 172 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 ACVR1BP36896 505 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 BCAP31P51572 246 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 PPP3R1P63098 170 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 SIRPAP78324 504 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 C1QL3Q5VWW1 255 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 FAM131AQ6UXB0 335 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 PAMR1Q6UXH9 720 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 OR8H2Q8N162 312 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 ABHD4Q8TB40 342 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 ZNRF4Q8WWF5 429 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 GHSRQ92847 366 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 PRRX2Q99811 253 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 TTTY10Q9BZA0 68 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 SRA1Q9HD15 236 aaKnown RBP8.26□□□□□ -1.09
PDPN-201ENST00000294489 POLE4Q9NR33 117 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 INIPQ9NRY2 104 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 GNG8Q9UK08 70 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 ZNF346Q9UL40 294 aaKnown RBP8.26□□□□□ -1.09
PDPN-201ENST00000294489 RABL2BQ9UNT1 228 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 CHCHD2Q9Y6H1 151 aaPredicted RBP8.26□□□□□ -1.09
PDPN-201ENST00000294489 SPEGQ15772 3267 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 MPDZO75970 2070 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 FABP12A6NFH5 140 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 FAM171A2A8MVW0 826 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 C11orf98E9PRG8 122 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 HPP00738 406 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 APOBEC1P41238 236 aaKnown RBP8.26□□□□□ -1.09
PDPN-201ENST00000294489 NBL1P41271 181 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 CAV3P56539 151 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 BTBD16Q32M84 506 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 CCDC58Q4VC31 144 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 MESTQ5EB52 335 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 LINC01590Q5TEZ4 76 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 RPL22L1Q6P5R6 122 aaKnown RBP8.26□□□□□ -1.09
PDPN-201ENST00000294489 RPTNQ6XPR3 784 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 SLC16A9Q7RTY1 509 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 CEACAM19Q7Z692 300 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 ZNF554Q86TJ5 538 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 FADS6Q8N9I5 356 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 SNRNP27Q8WVK2 155 aaKnown RBP8.26□□□□□ -1.09
PDPN-201ENST00000294489 DNAJA3Q96EY1 480 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 PELI1Q96FA3 418 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 GPR87Q9BY21 358 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 GALNT9Q9HCQ5 603 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 TAS2R5Q9NYW4 299 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 FOXJ2Q9P0K8 574 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 PPP4R1LQ9P1A2 415 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 NCDNQ9UBB6 729 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 COMMD3Q9UBI1 195 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 PISDQ9UG56 409 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 V9GYH0 126 aa8.26□□□□□ -1.09
PDPN-201ENST00000294489 C2orf72A6NCS6 295 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 C21orf140B9A014 251 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 OGG1O15527 345 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ARHGEF9O43307 516 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 PTTG1O95997 202 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 APOA1P02647 267 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 HNRNPCP07910 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
PDPN-201ENST00000294489 PRKCAP17252 672 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 GRPRP30550 384 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 MLF1P58340 268 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 MFSD13AQ14CX5 517 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms