RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CD63P08962 238 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 PSMD7P51665 324 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 MAP2K6P52564 334 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ZP4Q12836 540 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 MFSD13AQ14CX5 517 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 MS4A18Q3C1V0 323 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 CCDC58Q4VC31 144 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ACSM3Q53FZ2 586 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF684Q5T5D7 378 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 STEAP3Q658P3 488 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 SLC6A19Q695T7 634 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 PLEKHG7Q6ZR37 379 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 KCTD20Q7Z5Y7 419 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 CEACAM19Q7Z692 300 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 SLC22A16Q86VW1 577 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 EGFL6Q8IUX8 553 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 PM20D2Q8IYS1 436 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 TEX19Q8NA77 164 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 OR2M3Q8NG83 312 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 MFSD8Q8NHS3 518 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF417Q8TAU3 575 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF519Q8TB69 540 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ARL5BQ96KC2 179 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 SNX18Q96RF0 628 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF587Q96SQ5 575 aaPredicted RBP8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ATF6BQ99941 703 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 POTEKPQ9BYX7 375 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 RNF32Q9H0A6 362 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 CPNE5Q9HCH3 593 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 GNG8Q9UK08 70 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 VDAC3Q9Y277 283 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 LOXL2Q9Y4K0 774 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 WIF1Q9Y5W5 379 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 ZDBF2Q9HCK1 2354 aa8.65□□□□□ -1.02
TRIM55-201ENST00000276573 VCANP13611 3396 aa8.65□□□□□ -1.03
TRIM55-201ENST00000276573 XKRYO14609 159 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 CDX4O14627 284 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 TP53I11O14683 189 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 TRIM3O75382 744 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 ITGA10O75578 1167 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 NCR1O76036 304 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 STK17BO94768 372 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 PLGP00747 810 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 IGHMP01871 453 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 FOLR3P41439 243 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 FOXF1Q12946 379 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 CDK5R1Q15078 307 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 INPP5JQ15735 1006 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 PLPPR5Q32ZL2 321 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 DDI2Q5TDH0 399 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 OPN5Q6U736 354 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 PXKQ7Z7A4 578 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 CDC20BQ86Y33 519 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 ZNF248Q8NDW4 579 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 OR11G2Q8NGC1 345 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 POC1BQ8TC44 478 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 RELTQ969Z4 430 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 DDIT4LQ96D03 193 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 MRGPRX4Q96LA9 322 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 STRADBQ9C0K7 418 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 SYT4Q9H2B2 425 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 MARCH7Q9H992 704 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 PADI1Q9ULC6 663 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 B9D1Q9UPM9 204 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 FKBP7Q9Y680 259 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 R4GN57 208 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 V9GYH0 126 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 COL27A1Q8IZC6 1860 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 TRBV2A0A0J9YWF9 115 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 A0A1W2PQ72 361 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 PRSS37A4D1T9 235 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 TVP23AA6NH52 213 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 PRR32B1ATL7 298 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 SHISA8B8ZZ34 492 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 SERPINA3P01011 423 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 IMPDH2P12268 514 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 IL11P20809 199 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 EDNRAP25101 427 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 PSMB10P40306 273 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 GDI2P50395 445 aaKnown RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 ZNF41P51814 821 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 DNASE1L3Q13609 305 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 CCDC157Q569K6 752 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 C6orf15Q6UXA7 325 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 PAMR1Q6UXH9 720 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 IL20RBQ6UXL0 311 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 UNQ9370/PRO34162Q6UXP9 181 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 H1FNTQ75WM6 255 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 NDUFAF7Q7L592 441 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 RAB11FIP2Q7L804 512 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 TPRA1Q86W33 373 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 SCAIQ8N9R8 606 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 SMIM19Q96E16 107 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 DIRAS2Q96HU8 199 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 TAAR9Q96RI9 348 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 MNTQ99583 582 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 ZPBPQ9BS86 351 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 CCDC32Q9BV29 185 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 CDCP1Q9H5V8 836 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 POLE4Q9NR33 117 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 543.2 ms