RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 PIEZO1Q92508 2521 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 CELSR3Q9NYQ7 3312 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 CEP295Q9C0D2 2601 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 NCKAP5O14513 1909 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 A0A1W2PNR3 127 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 TMEM129A0AVI4 362 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 LINC01387J3KSC0 135 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 EFSO43281 561 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 AKR7A3O95154 331 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 APOL3O95236 402 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 OPN1LWP04000 364 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 SPI1P17947 270 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 GDF1P27539 372 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 DIO1P49895 249 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 ETV1P50549 477 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 P2RY4P51582 365 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 CCL11P51671 97 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 RPS7P62081 194 aaKnown RBP12.66□□□□□ -0.38
SS18-201ENST00000269137 C19orf57Q0VDD7 668 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 POU4F2Q12837 409 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 GGTLC2Q14390 218 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 PON3Q15166 354 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 TIGD6Q17RP2 521 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 HYAL4Q2M3T9 481 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 LCN1P1Q5VSP4 162 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 YRDCQ86U90 279 aaKnown RBP12.66□□□□□ -0.38
SS18-201ENST00000269137 OR9Q1Q8NGQ5 310 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 OR14L1PQ8NHC6 308 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 ZPLD1Q8TCW7 415 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 ISOC1Q96CN7 298 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 YIPF6Q96EC8 236 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 SCMH1Q96GD3 660 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 C5orf34Q96MH7 638 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 SCNM1Q9BWG6 230 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 ZNF703Q9H7S9 590 aaPredicted RBP12.66□□□□□ -0.38
SS18-201ENST00000269137 ASB6Q9NWX5 421 aa12.66□□□□□ -0.38
SS18-201ENST00000269137 APC2O95996 2303 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 LOC102725191A0A1B0GVB3 256 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 KLRC4-KLRK1H3BQV0 150 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 SULT2B1O00204 365 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 XKRYO14609 159 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 SEC14L5O43304 696 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 CEACAM4O75871 244 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 RENP00797 406 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 HPNP05981 417 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 GYPBP06028 91 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 SBK2P0C263 348 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 LIMS3P0CW19 117 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 LIMS4P0CW20 117 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 DAP3P51398 398 aaKnown RBP12.65□□□□□ -0.38
SS18-201ENST00000269137 SLC16A1P53985 500 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 ARG2P78540 354 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
SS18-201ENST00000269137 DEFB109BQ30KR1 87 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 FAM205BPQ63HN1 556 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 PAQR6Q6TCH4 344 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 NHLRC1Q6VVB1 395 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 B3GLCTQ6Y288 498 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 SHFQ7M4L6 423 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 ANKRD13BQ86YJ7 626 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 ACBD7Q8N6N7 88 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 TMEM99Q8N816 258 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 FDCSPQ8NFU4 85 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 OR51G2Q8NGK0 314 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 OR5M11Q96RB7 305 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 ZNF649Q9BS31 505 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 FUNDC2Q9BWH2 189 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 ADGRL4Q9HBW9 690 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 INPP5EQ9NRR6 644 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 B3GAT1Q9P2W7 334 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 MOKQ9UQ07 419 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 SPTBN4Q9H254 2564 aa12.65□□□□□ -0.38
SS18-201ENST00000269137 PRSS37A4D1T9 235 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 A6NIZ1 184 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 MYL12BO14950 172 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 KLK10O43240 276 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 DNPH1O43598 174 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 EIF1BO60739 113 aaKnown RBP12.65□□□□□ -0.39
SS18-201ENST00000269137 SERPINI2O75830 405 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 TRAPPC6AO75865 159 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 GLCEO94923 617 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 GLSO94925 669 aaPredicted RBP12.65□□□□□ -0.39
SS18-201ENST00000269137 PLGP00747 810 aaPredicted RBP12.65□□□□□ -0.39
SS18-201ENST00000269137 ACVR1BP36896 505 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 RAP1BP61224 184 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 RAP1AP62834 184 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 H3F3AP84243 136 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 HSF1Q00613 529 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 SPHARQ15513 63 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 GALNTL5Q7Z4T8 443 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 KDM8Q8N371 416 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 POMGNT2Q8NAT1 580 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 SNIP1Q8TAD8 396 aaKnown RBP12.65□□□□□ -0.39
SS18-201ENST00000269137 RAB2BQ8WUD1 216 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 KLHL15Q96M94 604 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 SFXN2Q96NB2 322 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 MGLLQ99685 303 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 MFRPQ9BY79 579 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 TTTY12Q9BZ98 90 aa12.65□□□□□ -0.39
SS18-201ENST00000269137 RPRD1BQ9NQG5 326 aaKnown RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms