RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 NANOS3P60323 173 aaKnown RBP13.7□□□□□ -0.22
XRCC1-201ENST00000262887 PON3Q15166 354 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 PGAP1Q75T13 922 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 LRRC25Q8N386 305 aaPredicted RBP13.7□□□□□ -0.22
XRCC1-201ENST00000262887 C2CD4CQ8TF44 421 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 RGP1Q92546 391 aaPredicted RBP13.7□□□□□ -0.22
XRCC1-201ENST00000262887 VRK1Q99986 396 aaPredicted RBP13.7□□□□□ -0.22
XRCC1-201ENST00000262887 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.69□□□□□ -0.22
XRCC1-201ENST00000262887 SLC25A12O75746 678 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 OR2F2O95006 317 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 S100A9P06702 114 aaKnown RBP13.69□□□□□ -0.22
XRCC1-201ENST00000262887 EPCAMP16422 314 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 LTBQ06643 244 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 OR2F1Q13607 317 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 GGTLC2Q14390 218 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF345Q14585 488 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 GLT8D1Q68CQ7 371 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 TMPRSS12Q86WS5 348 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 OR6K6Q8NGW6 343 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 THAP6Q8TBB0 222 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 ARRDC3Q96B67 414 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 HSPA12BQ96MM6 686 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 PDCD10Q9BUL8 212 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF350Q9GZX5 532 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 IL21RQ9HBE5 538 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 NIT2Q9NQR4 276 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 ASF1BQ9NVP2 202 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 OR5H14A6NHG9 310 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 PRNPP04156 253 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 LAG3P18627 525 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 NTHL1P78549 312 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 DCDP81605 110 aaKnown RBP13.69□□□□□ -0.22
XRCC1-201ENST00000262887 AVPI1Q5T686 147 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
XRCC1-201ENST00000262887 C12orf40Q86WS4 652 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 CCDC107Q8WV48 283 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 RBM14Q96PK6 669 aaKnown RBP13.69□□□□□ -0.22
XRCC1-201ENST00000262887 POFUT1Q9H488 388 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 C14orf105Q9NVL8 296 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 SPHK1Q9NYA1 384 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 TNFSF18Q9UNG2 199 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF337Q9Y3M9 751 aa13.69□□□□□ -0.22
XRCC1-201ENST00000262887 GXYLT2A0PJZ3 443 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 TGM5O43548 720 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 AK4P27144 223 aaPredicted RBP13.68□□□□□ -0.22
XRCC1-201ENST00000262887 GRPRP30550 384 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 SOX2P48431 317 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 RAB28P51157 221 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ST8SIA6P61647 398 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 BTN3A2P78410 334 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 PLA2G7Q13093 441 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 SLC35F3Q8IY50 421 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF558Q96NG5 402 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ALX4Q9H161 411 aaPredicted RBP13.68□□□□□ -0.22
XRCC1-201ENST00000262887 OR51M1Q9H341 326 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 TMEM27Q9HBJ8 222 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 SLC22A11Q9NSA0 550 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 CXXC1Q9P0U4 656 aaPredicted RBP13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF629Q9UEG4 869 aaPredicted RBP13.68□□□□□ -0.22
XRCC1-201ENST00000262887 APOBEC3BQ9UH17 382 aaKnown RBP13.68□□□□□ -0.22
XRCC1-201ENST00000262887 KCNE5Q9UJ90 142 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 SERTAD3Q9UJW9 196 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 MKL2Q9ULH7 1088 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 COL4A6Q14031 1691 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 A0A087WV48 116 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 TRBV23-1A0A0A0MS06 115 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 TMEM82A0PJX8 343 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 MEIS3P1A6NDR6 274 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 PMS2P2O95744 297 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 CD8AP01732 235 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 S100PP25815 95 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 CCR2P41597 374 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 BLOC1S1P78537 153 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 SGCAQ16586 387 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 BEX5Q5H9J7 111 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 DCST2Q5T1A1 773 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 YOD1Q5VVQ6 348 aaPredicted RBP13.68□□□□□ -0.22
XRCC1-201ENST00000262887 SLC39A11Q8N1S5 342 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 STEAP2Q8NFT2 490 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ZNRF4Q8WWF5 429 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 WNT2BQ93097 391 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF559Q9BR84 538 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 C1orf198Q9H425 327 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 FBXO34Q9NWN3 711 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 MYEF2Q9P2K5 600 aaKnown RBP13.68□□□□□ -0.22
XRCC1-201ENST00000262887 CHRNA9Q9UGM1 479 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 IER3IP1Q9Y5U9 82 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 KIAA0100Q14667 2235 aaKnown RBP13.68□□□□□ -0.22
XRCC1-201ENST00000262887 S100A8P05109 93 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 CRYBA1P05813 215 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 OR4E1P0C645 316 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ADRB3P13945 408 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ADRA2CP18825 462 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 PTAFRP25105 342 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 GUCA2AQ02747 115 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 MTSS1LQ765P7 747 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 ZFP82Q8N141 532 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 DMBX1Q8NFW5 382 aa13.68□□□□□ -0.22
XRCC1-201ENST00000262887 RPS4Y2Q8TD47 263 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms