RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 RPTNQ6XPR3 784 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SYT12Q8IV01 421 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 LRRC52Q8N7C0 313 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CHST4Q8NCG5 386 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR10AD1Q8NGE0 317 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR8J3Q8NGG0 315 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR8S1Q8NH09 359 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 STT3BQ8TCJ2 826 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TFAP2BQ92481 460 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TVP23CQ96ET8 276 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ZC3HAV1LQ96H79 300 aaKnown RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM19Q96HH6 336 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 NDC1Q9BTX1 674 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CCDC88AQ3V6T2 1871 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF816-ZNF321PA0A0X1KG74 233 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CLEC18AA5D8T8 446 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 HELTA6NFD8 242 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TLX3O43711 291 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 UBL3O95164 117 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CYB5AP00167 134 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 MBPP02686 304 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SNRPCP09234 159 aaKnown RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 BPIP17213 487 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TCN2P20062 427 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 GPR3P46089 330 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 FXYD6P3P58550 94 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC35A2P78381 396 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 DUSP8Q13202 625 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF776Q68DI1 518 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CLEC18BQ6UXF7 455 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OTOP2Q7RTS6 562 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 LAS2Q8IYD9 372 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TOP6BLQ8N6T0 577 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CLEC18CQ8NCF0 446 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR51L1Q8NGJ5 315 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR1N1Q8NGS0 311 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR2Y1Q8NGV0 311 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR13C6PQ8NH95 151 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ATP6V0BQ99437 205 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ING1Q9UK53 422 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TRBV2A0A0J9YWF9 115 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 A0A1W2PQ45 241 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 A0A1W2PQY0 241 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TBC1D3FA6NER0 549 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CD8B2A6NJW9 211 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 H7C417 338 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 NTF3P20783 257 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 JAM2P57087 298 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TAS2R31P59538 309 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 IL2P60568 153 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SRSF5Q13243 272 aaKnown RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 GPR18Q14330 331 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 LAPTM4AQ15012 233 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 COX19Q49B96 90 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF679Q8IYX0 411 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR8J1Q8NGP2 316 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR2T27Q8NH04 317 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 HIST1H2BAQ96A08 127 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ISL2Q96A47 359 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC25A46Q96AG3 418 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 PRRC1Q96M27 445 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SPON2Q9BUD6 331 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 PECRQ9BY49 303 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 FBXO44Q9H4M3 255 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 RNF150Q9ULK6 438 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 BNIP3LO60238 219 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SCG5P05408 212 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 BDKRB1P46663 353 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 FMO1Q01740 532 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 MAMLD1Q13495 774 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF770Q6IQ21 691 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF627Q7L945 461 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR4K17Q8NGC6 315 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 RHBDD1Q8TEB9 315 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ROBO4Q8WZ75 1007 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CD180Q99467 661 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ANAPC13Q9BS18 74 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 KIR3DX1Q9H7L2 352 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SRA1Q9HD15 236 aaKnown RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ACSS2Q9NR19 701 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 A0A1W2PPV4 95 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 FAM159BA6NKW6 160 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SDHDO14521 159 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 PGAM2P15259 253 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 NTSP30990 170 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SULT1A1P50225 295 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SMAGPQ0VAQ4 97 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 C9orf135Q5VTT2 229 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF573Q86YE8 665 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 DNASE1L2Q92874 299 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 RGMAQ96B86 450 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SNX22Q96L94 193 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 DERL1Q9BUN8 251 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 ABI3Q9P2A4 366 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 PSORS1C1Q9UIG5 152 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 Q9Y3F1 56 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 OR2AG2A6NM03 316 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 B4GALT5O43286 388 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 ADAP1O75689 374 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms