RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 C3orf36Q3SXR2 165 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 FAM91A1Q658Y4 838 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 FAM166AQ6J272 317 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 ANKRD16Q6P6B7 361 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 EPHX4Q8IUS5 362 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 C11orf65Q8NCR3 313 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 CCDC197Q8NCU1 140 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 HIPK4Q8NE63 616 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 OR4F15Q8NGB8 312 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 SLC35B4Q969S0 331 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 CRNNQ9UBG3 495 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 KCNS2Q9ULS6 477 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 LOC390937A0A1W2PQ73 354 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 VWC2LB2RUY7 222 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 UPK3AO75631 287 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 PNMTP11086 282 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 PCGF2P35227 344 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 NR4A2P43354 598 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 RPS5P46782 204 aaKnown RBP11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 CLDN17P56750 224 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 ROR2Q01974 943 aaKnown RBP11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 NAAAQ02083 359 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 LGALS3BPQ08380 585 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 CARTPTQ16568 116 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 IQCCQ4KMZ1 466 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 C5orf46Q6UWT4 87 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 ARPINQ7Z6K5 226 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 CALHM3Q86XJ0 350 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 FAM169BQ8N8A8 192 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 ZNF540Q8NDQ6 660 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 ECSITQ9BQ95 431 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 EFCAB1Q9HAE3 211 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 RCE1Q9Y256 329 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 CHST2Q9Y4C5 530 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 ABCA1O95477 2261 aa11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 FBN1P35555 2871 aaKnown RBP11.23□□□□□ -0.61
APOBEC3A-201ENST00000249116 A0A096LPE4 126 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 A0A1W2PPZ6 126 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 FTCDNL1E5RQL4 147 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 RPL36A-HNRNPH2H7BZ11 118 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 AKAP8O43823 692 aaKnown RBP11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 OR2T1O43869 369 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 SLC43A1O75387 559 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 ERCC1P07992 297 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 OR4A8P0C604 315 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 CECR9P0C854 216 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 APEHP13798 732 aaKnown RBP11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 HNF1AP20823 631 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 AQP1P29972 269 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 PPOXP50336 477 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 PCBP3P57721 371 aaKnown RBP11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 TUBA1BP68363 451 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 TUBA4AP68366 448 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 C1DQ13901 141 aaKnown RBP11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 EFNB3Q15768 340 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 C8orf82Q6P1X6 216 aaPredicted RBP11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 VHLLQ6RSH7 139 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 TUBA1AQ71U36 451 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 LINGO2Q7L985 606 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 KRT73Q86Y46 540 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 SLC30A8Q8IWU4 369 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 KDM8Q8N371 416 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 GPR137CQ8N3F9 429 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 OXGR1Q96P68 337 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 RAB1BQ9H0U4 201 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 C12orf10Q9HB07 376 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 FBN3Q75N90 2809 aa11.22□□□□□ -0.61
APOBEC3A-201ENST00000249116 LOC100289279A0A1B0GTE1 492 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 FAM220BPB1ANY3 271 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 NDUFAB1O14561 156 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 IGKV3-15P01624 115 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 IGLV1-44P01699 117 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 CBR1P16152 277 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 SRD5A1P18405 259 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 PRKAR1BP31321 381 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 THBS2P35442 1172 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 IDH3GP51553 393 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 ARF1P84077 181 aaKnown RBP11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 HOXC5Q00444 222 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 ADIPOQQ15848 244 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 VMACQ2NL98 169 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 FAM69AQ5T7M9 428 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 C6orf89Q6UWU4 347 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 FITM2Q8N6M3 262 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 PIK3C3Q8NEB9 887 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 NUP37Q8NFH4 326 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 BCAS4Q8TDM0 211 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 SLC38A4Q969I6 547 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 ZNF583Q96ND8 569 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 FOXN4Q96NZ1 517 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 ZNF607Q96SK3 696 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 HOPXQ9BPY8 73 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 PTDSS2Q9BVG9 487 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 SPATA5L1Q9BVQ7 753 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 PLK3Q9H4B4 646 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 CHODLQ9H9P2 273 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 ARL8BQ9NVJ2 186 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 CMTM6Q9NX76 183 aa11.21□□□□□ -0.61
APOBEC3A-201ENST00000249116 TAGLN3Q9UI15 199 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms