RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 FHL5Q5TD97 284 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC18B1Q6NT16 456 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 KCTD20Q7Z5Y7 419 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 ELMOD2Q8IZ81 293 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF578Q96N58 590 aaPredicted RBP13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 NOX3Q9HBY0 568 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC6A5Q9Y345 797 aa13.66□□□□□ -0.22
UBE2D4-201ENST00000222402 DOK2O60496 412 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 PTP4A3O75365 173 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 CSNK1EP49674 416 aaKnown RBP13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 TIGD3Q6B0B8 471 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 OR14A16Q8NHC5 309 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 PRDM9Q9NQV7 894 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 COPS3Q9UNS2 423 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 MOKQ9UQ07 419 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 DCDC2BA2VCK2 349 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 IFITM5A6NNB3 132 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 PTHLHP12272 177 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 FXYD6P3P58550 94 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 VWA2Q5GFL6 755 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 FAM69AQ5T7M9 428 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 PRAMEF17Q5VTA0 474 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 GPR139Q6DWJ6 353 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC16A9Q7RTY1 509 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 PLXDC1Q8IUK5 500 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC22A18ASQ8N1D0 253 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 LRRC20Q8TCA0 184 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 FLVCR2Q9UPI3 526 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 VDAC3Q9Y277 283 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 ARID1AO14497 2285 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 TRAV1-2A0A0B4J238 106 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 A0A1B0GVI7 797 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF780AO75290 641 aaPredicted RBP13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF432O94892 652 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 NGFRP08138 427 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 CCDC58Q4VC31 144 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF362Q5T0B9 420 aaPredicted RBP13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 METTL11BQ5VVY1 283 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 GLT8D1Q68CQ7 371 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 VASNQ6EMK4 673 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 FAAP20Q6NZ36 180 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 KDM8Q8N371 416 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF304Q9HCX3 659 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 COMMD9Q9P000 198 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 FARSAQ9Y285 508 aaKnown RBP13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 LRRK1Q38SD2 2015 aa13.65□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF593O00488 134 aaPredicted RBP13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 RGS13O14921 159 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 ZFPL1O95159 310 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 SLC6A1P30531 599 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 SDHAP31040 664 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 NPSR1Q6W5P4 371 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 FAM181AQ8N9Y4 354 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 DUSP19Q8WTR2 217 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 RAB40ALP0C0E4 278 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 CDKN2AP42771 156 aaKnown RBP13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 CCR5P51681 352 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 RAB11BQ15907 218 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 MEP1BQ16820 701 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 DNM1P34Q6PK57 102 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 SIX5Q8N196 739 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 RAB40AQ8WXH6 277 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 TMEM234Q8WY98 164 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 NXPE2Q96DL1 559 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 MOGAT1Q96PD6 335 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 C20orf85Q9H1P6 137 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 WDR76Q9H967 626 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 HAO2Q9NYQ3 351 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 PTH2RP49190 550 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 LIMK1P53667 647 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 TOMM20Q15388 145 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 LSMEM1Q8N8F7 131 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 OR51D1Q8NGF3 324 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 CEP76Q8TAP6 659 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 LRFN5Q96NI6 719 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 KLK11Q9UBX7 282 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 CHRNA9Q9UGM1 479 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 C2CD4DB7Z1M9 353 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 H3BML4 177 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 AIPO00170 330 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 ICOSLGO75144 302 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 ALDOBP05062 364 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 RPS4Y1P22090 263 aaKnown RBP13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 CCINQ13939 588 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 EIF2B1Q14232 305 aaKnown RBP13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF141Q15928 474 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 CCDC157Q569K6 752 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 GRAMD2AQ8IUY3 354 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 PHYHIPQ92561 330 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 ZMIZ1Q9ULJ6 1067 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 MAB21L2Q9Y586 359 aa13.64□□□□□ -0.23
UBE2D4-201ENST00000222402 IGHV5-51A0A0C4DH38 117 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 A0A1B0GTH9 108 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 A6NCN8 305 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 PHYHO14832 338 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ALX3O95076 343 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms