RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 MKXQ8IYA7 352 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 NSG2Q9Y328 171 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 ZNF727A8MUV8 499 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 TRAPPC2LH3BP13 241 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 GPR17Q13304 367 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 PLCXD3Q63HM9 321 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 PRR18Q8N4B5 295 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 SGPP1Q9BX95 441 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 ELOVL3Q9HB03 270 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 BCL2L11O43521 198 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 HOXA1P49639 335 aaPredicted RBP12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 RAET1LQ5VY80 246 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 WDR76Q9H967 626 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 NOX4Q9NPH5 578 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 AKIP1Q9NQ31 210 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 ELOA3CA0A087WX78 387 aaPredicted RBP12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 TCAPO15273 167 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 XRCC3O43542 346 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 ZNF207O43670 478 aaKnown RBP12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 FKBP1BP68106 108 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 TCTEX1D1Q8N7M0 179 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 ZNRF4Q8WWF5 429 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 SOX7Q9BT81 388 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 ARID1AO14497 2285 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 TMEM269A0A1B0GVZ9 245 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 NME2P1O60361 137 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 SLC35D3Q5M8T2 416 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 OR13D1Q8NGV5 346 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 CXorf58Q96LI9 332 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 C11orf49Q9H6J7 331 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 MED9Q9NWA0 146 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 MYOTQ9UBF9 498 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 OR8U8P0C7N1 319 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 APLNRP35414 380 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 ZNF90Q03938 601 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 HSD17B11Q8NBQ5 300 aa12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 INTS12Q96CB8 462 aaKnown RBP12.76□□□□□ -0.37
SIPA1L3-201ENST00000222345 FEZF1A0PJY2 475 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 CLEC1AQ8NC01 280 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SEMA6CQ9H3T2 930 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 A0A087X0M5 115 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 A0A1B0GX30 115 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 FAM189BP81408 668 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 REEP5Q00765 189 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 MBOAT2Q6ZWT7 520 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 CDCA4Q9BXL8 241 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SLC2A4RGQ9NR83 387 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 WRAP73Q9P2S5 460 aaPredicted RBP12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 B4GALT6Q9UBX8 382 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 F5H5K5 113 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 ST8SIA3O43173 380 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 PEX10O60683 326 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 BIDP55957 195 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 COL9A3Q14050 684 aaPredicted RBP12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 NANOGP1Q8N7R0 232 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 TSTD1Q8NFU3 115 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 ESRP2Q9H6T0 727 aaKnown RBP12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 HRASLS2Q9NWW9 162 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 CACFD1Q9UGQ2 172 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 PHF1O43189 567 aaPredicted RBP12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 LCTLQ6UWM7 567 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 CATSPERDQ86XM0 798 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 RBMXL3Q8N7X1 1067 aaKnown RBP12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 OR4A16Q8NH70 328 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 RASD2Q96D21 266 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SLC41A2Q96JW4 573 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 CHEK1O14757 476 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SIGLEC6O43699 453 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 LIPAP38571 399 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SIM1P81133 766 aaPredicted RBP12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 GPM6BQ13491 265 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 GGNBP1Q5YKI7 109 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 C5orf46Q6UWT4 87 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 ZNF778Q96MU6 729 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 NTF3P20783 257 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 DCCP43146 1447 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 PDE7AQ13946 482 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 CD200R1Q8TD46 325 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 FAM173AQ9BQD7 235 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 PIGQQ9BRB3 760 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 ABHD6Q9BV23 337 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SORBS1Q9BX66 1292 aaKnown RBP12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 PLK3Q9H4B4 646 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 NUMBLQ9Y6R0 609 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 UBR2Q8IWV8 1755 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 TRBV4-1A0A0J9YWV2 114 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SLC11A1P49279 550 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SLC35A2P78381 396 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SAXO2Q658L1 398 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 SUMF1Q8NBK3 374 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 FAM3DQ96BQ1 224 aa12.75□□□□□ -0.37
SIPA1L3-201ENST00000222345 FAM221BA6H8Z2 402 aa12.74□□□□□ -0.37
SIPA1L3-201ENST00000222345 CHRM2P08172 466 aa12.74□□□□□ -0.37
SIPA1L3-201ENST00000222345 OR1Q1Q15612 314 aa12.74□□□□□ -0.37
SIPA1L3-201ENST00000222345 PSAPL1Q6NUJ1 521 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms