RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RUNX2Q13950 521 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 SPHARQ15513 63 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 OR2A1Q8NGT9 310 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 SLC38A5Q8WUX1 472 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 GUCD1Q96NT3 240 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 EIF4E2O60573 245 aaKnown RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 ELAVL4P26378 380 aaKnown RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 MFAP5Q13361 173 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 H1FNTQ75WM6 255 aaPredicted RBP12.62□□□□□ -0.39
SIX4-201ENST00000216513 GPR155Q7Z3F1 870 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 ABI3BPQ7Z7G0 1075 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 NLRP8Q86W28 1048 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 ACOT12Q8WYK0 555 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 PSMF1Q92530 271 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 TMEM9Q9P0T7 183 aa12.62□□□□□ -0.39
SIX4-201ENST00000216513 PRAMEF4O60810 478 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 TPPPO94811 219 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 CALCBP10092 127 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 TGM4P49221 684 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 ZNF83P51522 516 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 SLC14A1Q13336 389 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 SLC22A6Q4U2R8 563 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 TMEM185AQ8NFB2 350 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 BEST4Q8NFU0 473 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 PHB2Q99623 299 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 MGAT4CQ9UBM8 478 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 RAB35Q15286 201 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 OR8G1Q15617 311 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 BEX5Q5H9J7 111 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 ZNF836Q6ZNA1 936 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 ANKRD37Q7Z713 158 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 OR11A1Q9GZK7 315 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 COL4A1P02462 1669 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 SBF2Q86WG5 1849 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 A0A1W2PR80 420 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 PRTGQ2VWP7 1150 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 OVCH1Q7RTY7 1134 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 TMEM105Q8N8V8 129 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 ZNF709Q8N972 641 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 LINC00615Q96LM1 132 aaPredicted RBP12.61□□□□□ -0.39
SIX4-201ENST00000216513 GALNT9Q9HCQ5 603 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 GHRLQ9UBU3 117 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 FZD7O75084 574 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 GPX3P22352 226 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 C21orf33P30042 268 aaPredicted RBP12.61□□□□□ -0.39
SIX4-201ENST00000216513 PPICP45877 212 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 FABP6P51161 128 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 CLDN12P56749 244 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 COX20Q5RI15 118 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 PGAP1Q75T13 922 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 ARAP2Q8WZ64 1704 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 MIB2Q96AX9 1013 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 TNFRSF13CQ96RJ3 184 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 TXLNGYQ9BZA5 131 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 MAGIXQ9H6Y5 334 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 DDX31Q9H8H2 851 aaKnown RBP12.61□□□□□ -0.39
SIX4-201ENST00000216513 COPZ2Q9P299 210 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 PILRBQ9UKJ0 227 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 H0YAE9 185 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 RGS9O75916 674 aaPredicted RBP12.61□□□□□ -0.39
SIX4-201ENST00000216513 RBMXP38159 391 aaKnown RBP12.61□□□□□ -0.39
SIX4-201ENST00000216513 ADGRF3Q8IZF5 1079 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 CNOT9Q92600 299 aaKnown RBP12.61□□□□□ -0.39
SIX4-201ENST00000216513 CSF3RQ99062 836 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 TTC3P53804 2025 aa12.61□□□□□ -0.39
SIX4-201ENST00000216513 A1L4Q6 167 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 H7C2Y5 167 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 IKZF1Q13422 519 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 SERPINA11Q86U17 422 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 OR5D14Q8NGL3 314 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 C15orf40Q8WUR7 153 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 CREB3L1Q96BA8 519 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 ZNF582Q96NG8 517 aaPredicted RBP12.6□□□□□ -0.39
SIX4-201ENST00000216513 GNRHR2Q96P88 292 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 RDH8Q9NYR8 311 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 MRPS18BQ9Y676 258 aaKnown RBP12.6□□□□□ -0.39
SIX4-201ENST00000216513 LRRN3E7EW58 273 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 ALDOBP05062 364 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 SELENBP1Q13228 472 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 KEAP1Q14145 624 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 S100PBPQ96BU1 408 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 UBXN10Q96LJ8 280 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 NUDT9Q9BW91 350 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 OCEL1Q9H607 264 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 ZNF195O14628 629 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 ZMAT1Q5H9K5 638 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 ZNF300Q96RE9 604 aaPredicted RBP12.6□□□□□ -0.39
SIX4-201ENST00000216513 GNG12Q9UBI6 72 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 CORINQ9Y5Q5 1042 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 RP1L1Q8IWN7 2480 aaPredicted RBP12.6□□□□□ -0.39
SIX4-201ENST00000216513 C5orf49A4QMS7 147 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 C21orf140B9A014 251 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 INMT-MINDY4F8WBC2 141 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 AGPAT2O15120 278 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 NKX2-8O15522 239 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 FAM185AQ8N0U4 392 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 MINDY2Q8NBR6 621 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 AKAP1Q92667 903 aaKnown RBP eCLIP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms