RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Vmn1r200Q8R281 312 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Actr1bQ8R5C5 376 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr97Q8VFE1 310 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr651Q8VG78 313 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Eps8l3Q91WL0 600 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Obp1aQ9D3H2 163 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Jam3Q9D8B7 310 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Mmp1bQ9EPL6 463 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 AireQ9Z0E3 552 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 SpegQ62407 3262 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Loxhd1C8YR32 2068 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm42372A0A1B0GT27 204 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 4930402F06RikA2AUQ8 332 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr1314A2AVL6 312 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Stpg3A2RSX4 306 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm45062E0CZ38 131 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Fcer1aP20489 250 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 DbiP31786 87 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 FaslgP41047 279 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zdhhc2P59267 366 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Pou3f4P62515 361 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 S100gP97816 79 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Tfb2mQ3TL26 396 aaKnown RBP10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Shisa3Q3UPR0 238 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Obox3Q3UT54 335 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Fbxw16Q497Z0 464 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Tssk1bQ61241 365 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Mgat4aQ812G0 535 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Phf21bQ8C966 487 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Rdh1Q8CGV4 317 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Fitm1Q91V79 292 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Sucnr1Q99MT6 317 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Tmem218Q9CQ44 115 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr971Q9EQ96 307 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Klhl1Q9JI74 751 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 DiabloQ9JIQ3 237 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Six6Q9QZ28 246 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Asah1Q9WV54 394 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Tomm5B1AXP6 51 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 CatsperdE9Q9F6 805 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm20683H3BKJ1 410 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm21797J3QNW5 180 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 OtpO09113 325 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Prl8a2O54832 240 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 LplP11152 474 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 LhcgrP30730 700 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 RetP35546 1115 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ca10P61215 328 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 4930480E11RikQ0VG34 394 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Slc2a6Q3UDF0 497 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ankrd53Q3V0J4 497 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Lin28bQ45KJ6 247 aaKnown RBP10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 SpicQ6P3D7 242 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Fbxo34Q80XI1 695 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Pced1bQ8BGX1 433 aaKnown RBP10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Q8BPC6 396 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Mab21l2Q8BPP1 359 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Pithd1Q8BWR2 211 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Cldn17Q8BXA6 224 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Eipr1Q8K0G5 386 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zdhhc6Q9CPV7 413 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Senp8Q9D2Z4 221 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Q9DAR0 182 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 PmpcaQ9DC61 524 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Nkx2-4Q9EQM3 354 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Lbx2Q9WUN8 195 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Bod1lE9Q6J5 3032 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 F8Q06194 2319 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 AI182371A2AS37 356 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 SrsxB2RZI1 361 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Btbd2E9PUS2 523 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Alx4O35137 399 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Nipsnap1O55125 284 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Nipsnap2O55126 281 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Dnaaf3Q3UYV8 586 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Grhl3Q5FWH3 603 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Dag1Q62165 893 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 N6amt1Q6SKR2 214 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 P2ry10bQ8BY68 352 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Cnppd1Q8K158 407 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr734Q8VFT4 313 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Papd4Q91YI6 484 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Dmac2Q9D7K5 258 aaKnown RBP10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Vmn1r53Q9EP93 310 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Isyna1Q9JHU9 557 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Sfrp5Q9WU66 314 aa10.65□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr560A0A1B0GSU5 314 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 R3hdmlA2A5I3 253 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Col9a3A2ACT7 680 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Gm17067E9Q6S4 354 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Zfp707F6QUN2 391 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 LipiF6YQT7 476 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Kcns1O35173 497 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 IghgP01863 330 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Rplp0P14869 317 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Cox4i1P19783 169 aaKnown RBP10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Tbx4P70325 552 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Fgf11P70378 225 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Dus4lQ32M08 324 aa10.64□□□□□ -0.71
Col9a1-202ENSMUST00000088349 2410002F23RikQ3TE80 284 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms