RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 SgtbQ8VD33 304 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Lrch4Q921G6 680 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Abcg5Q99PE8 652 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Cdca4Q9CWM2 237 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Rps19Q9CZX8 145 aaKnown RBP20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Fam166aQ9D4K5 319 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ubqln2Q9QZM0 638 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm17190V9GX38 357 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Igkv12-44A0A140T8M2 115 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 A0A1Y7VIU7 259 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Prss56F2YMG0 604 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Smim18J3QNP2 93 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr889L7N1Y6 314 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 P01808 119 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Barhl1P63157 327 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Prdm6Q3UZD5 596 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Hsd17b13Q8VCR2 304 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr1020Q8VFK7 317 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Nkx6-1Q99MA9 365 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ropn1lQ9EQ00 218 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Cldn14Q9Z0S3 239 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm20489A2AGH5 449 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ces2gE9PV38 560 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 FaimlJ3QPY3 178 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 RetP35546 1115 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Polr1cP52432 346 aaKnown RBP20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gnb5P62881 395 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Spata13Q5DU57 656 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Klhl6Q6V595 619 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 PigvQ7TPN3 493 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 SynbQ8BI41 618 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Amdhd2Q8JZV7 409 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 DctdQ8K2D6 178 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Slc35a3Q8R1T4 326 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Vmn1r200Q8R281 312 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 NrarpQ91ZA8 114 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Prg4Q9JM99 1054 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 NfkbiaQ9Z1E3 314 aa20.84■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr1034A0A1L1ST14 310 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Esp18A8R0V1 91 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Spata6lB2RV46 347 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Zfp54E9PW05 585 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm8127E9Q0P0 100 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm21319F6YNI8 144 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm8094K7N6U8 211 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 MbpP04370 250 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Hp1bp3Q3TEA8 554 aaKnown RBP20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Rnf122Q8BP31 155 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Cyp51a1Q8K0C4 503 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 P2rx2Q8K3P1 485 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Acp1Q9D358 158 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Arpc5lQ9D898 153 aa20.83■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Abca4O35600 2310 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cd300ld4A2A7W1 245 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 ItpkbB2RXC2 942 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Vmn2r95L7N274 845 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 C1dO35473 141 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Eml4Q3UMY5 988 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Zfp974Q3UVF6 752 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cd300ld3Q6SJQ5 245 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Gpatch2Q7TQC7 527 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 H2-M10.3Q85ZW6 330 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Elmod2Q8BGF6 293 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Nup107Q8BH74 926 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Nyap2Q8BM65 682 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Mcfd2Q8K5B2 145 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr692Q8VF03 329 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Ddx28Q9CWT6 540 aaKnown RBP20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 PaicsQ9DCL9 425 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Pla2g12aQ9EPR2 192 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 TapbpQ9R233 465 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Macc1E9PXX8 851 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Vmn2r99H3BK37 856 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Slc22a1O08966 556 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 DdostO54734 441 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 P01822 137 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 VipP32648 170 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tmprss11cQ1JRP2 431 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Mtmr11Q3V1L6 700 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Slc44a5Q5RJI2 710 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Rdh16f2Q8K3M1 318 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Lnx2Q91XL2 687 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Q99K99 313 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Lpar2Q9JL06 348 aa20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tnrc6aQ3UHK8 1896 aaKnown RBP20.82■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr740E9PV79 311 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Nme6O88425 189 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 MscO88940 201 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 CyctP00015 105 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Limk1P53668 647 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Rps15P62843 145 aaKnown RBP20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Laptm4aQ60961 233 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 BocQ6AZB0 1110 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Znf511Q6P0X2 227 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Mettl27Q8BGM4 238 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Plekhm3Q8BM47 761 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 SprnQ8BWU1 147 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Hbq1aQ8BYM1 145 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Znf322Q8BZ89 410 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Kiss1rQ91V45 396 aa20.81■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms