RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Hyal3Q8VEI3 412 aa9.57□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Dcbld2Q91ZV3 769 aa9.57□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Polr2hQ923G2 150 aa9.57□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 HypmQ9CR04 117 aa9.57□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 MmabQ9D273 237 aa9.57□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r172Q9EPS4 313 aa9.57□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Nox4Q9JHI8 578 aa9.57□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1112A2ATA0 318 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cldn34aG3UW52 211 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm527Q4KL13 310 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Lin54Q571G4 749 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Nptx1Q62443 432 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Igsf5Q7TSN7 370 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ticam1Q80UF7 732 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 NelfaQ8BG30 530 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Esco2Q8CIB9 592 aaKnown RBP9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Plekho2Q8K124 495 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr131Q8VGC8 314 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Lgi1Q9JIA1 557 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 MyotQ9JIF9 496 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Actr10Q9QZB7 417 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm26992S4R1A3 76 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Zfp873A0A1B0GT64 667 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tmem240B2RWJ3 173 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Zfp871G5E905 615 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1425K7N659 312 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 mt-Co3P00416 261 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ercc1P07903 298 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Nrg2P56974 756 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gfi1P70338 423 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Csf2raQ00941 388 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r223Q5SSA0 361 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 H2-M2Q6W9L1 343 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cpeb2Q812E0 521 aaKnown RBP9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Mrpl22Q8BU88 206 aaKnown RBP9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 MdficQ8BX65 247 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Prkd2Q8BZ03 875 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r28Q8R2C9 302 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1426Q8VG74 311 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cdhr1Q8VHP6 859 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 NrarpQ91ZA8 114 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r53Q9EP93 310 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr971Q9EQ96 307 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 HrgQ9ESB3 525 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 MokQ9WVS4 420 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Plin4O88492 1403 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm4131A0A140LJ24 318 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm3543D3Z235 184 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr653E9PVA0 317 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 SparcP07214 302 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 P58686 83 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tubal3Q3UX10 446 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Csnk2a1Q60737 391 aaKnown RBP9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Adam9Q61072 845 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ugt8Q64676 541 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Fam122bQ6NZE7 255 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ube2j2Q6P073 259 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tra2aQ6PFR5 281 aaKnown RBP9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 LcorQ6ZPI3 433 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 HhipQ7TN16 700 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Otop1Q80VM9 600 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ubr7Q8BU04 425 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 NraddQ8CJ26 228 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1504Q8VFQ4 315 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr447Q8VGP6 310 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr166Q8VGX2 312 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Itfg2Q91WI7 443 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Spef1Q99JL1 234 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Pdzk1ip1Q9CQH0 114 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Dapp1Q9QXT1 280 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ighv16-1A0A0A6YW39 117 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ppp1r3dA2AJW4 279 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Esp18A8R0V1 91 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gabrr3B2RXA8 464 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Maml2F6U238 1170 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Nfatc1O88942 717 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Hbb-bh0P04443 147 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ctla4P09793 223 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Stfa2P35174 103 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ccr1l1P51676 356 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Dlx5P70396 289 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 FcrlbQ5DRQ8 427 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cfap161Q6P8Y0 303 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr885Q7TRE0 309 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ppp1r3eQ8BRJ4 279 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gpr157Q8C206 330 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 RfesdQ8K2P6 157 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 NotumQ8R116 503 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Utp4Q8R2N2 686 aaKnown RBP9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cdca4Q9CWM2 237 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cir1Q9DA19 450 aa9.56□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Atxn7l3A2AWT3 347 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Syt3O35681 587 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 FiglaO55208 194 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Camk2aP11798 478 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr13P34984 310 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Clec3bP43025 202 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Bcl2a1cQ0P538 128 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Defb25Q30KN8 71 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Xkr5Q5GH66 676 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms