RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 SLC38A1Q9H2H9 487 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 SYNPO2LQ9H987 977 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 TBC1D17Q9HA65 648 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 RASL12Q9NYN1 266 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 GSTK1Q9Y2Q3 226 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 EXOSC1Q9Y3B2 195 aaKnown RBP11.44□□□□□ -0.58
LITAF-221ENST00000622633 MYO10Q9HD67 2058 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 AP4M1O00189 453 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 MID1O15344 667 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 ARPC5O15511 151 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 MBTPS2O43462 519 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 NFATC1O95644 943 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 HOXC12P31275 282 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 GABRA5P31644 462 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 DRD3P35462 400 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 IFNGR2P38484 337 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 CDH11P55287 796 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 RAG2P55895 527 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 PKIAP61925 76 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 ZSWIM7Q19AV6 140 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 MRGPREQ86SM8 312 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 FJX1Q86VR8 437 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 NUP43Q8NFH3 380 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 OR56A1Q8NGH5 318 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 SFXN5Q8TD22 340 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 LCORQ96JN0 433 aaPredicted RBP11.44□□□□□ -0.58
LITAF-221ENST00000622633 TSPAN10Q9H1Z9 355 aaPredicted RBP11.44□□□□□ -0.58
LITAF-221ENST00000622633 OR10H1Q9Y4A9 318 aa11.44□□□□□ -0.58
LITAF-221ENST00000622633 PTPRSQ13332 1948 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 IRGMA1A4Y4 181 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 FCMRO60667 390 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ABOP16442 354 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 CSNK2A2P19784 350 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 NOS3P29474 1203 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 MAP3K8P41279 467 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 GPR4P46093 362 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 OMPP47874 163 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 LSM6P62312 80 aaKnown RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 BLOC1S1P78537 153 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 OR52W1Q6IF63 320 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 MRM1Q6IN84 353 aaKnown RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 ZNF613Q6PF04 617 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ZSCAN1Q8NBB4 408 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ZNF485Q8NCK3 441 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 CPEB3Q8NE35 698 aaKnown RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 BBS1Q8NFJ9 593 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 PIGXQ8TBF5 258 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ACOT11Q8WXI4 607 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 DIO2Q92813 273 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 TGM7Q96PF1 710 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ARHGDIGQ99819 225 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 CACNG6Q9BXT2 260 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 TEX101Q9BY14 249 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 PRO1933Q9H354 126 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 PIGMQ9H3S5 423 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 C6orf106Q9H6K1 298 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 WDR26Q9H7D7 661 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ISYNA1Q9NPH2 558 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 CA10Q9NS85 328 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ZNF629Q9UEG4 869 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 CES1P1Q9UKY3 287 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 GOLT1BQ9Y3E0 138 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 TRPM6Q9BX84 2022 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 NPIPB9F8W1W9 429 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 BCAT2O15382 392 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 EMC8O43402 210 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ZIC2O95409 532 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 SLC2A10O95528 541 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 CELP19835 753 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 CSNK1EP49674 416 aaKnown RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 SURF2Q15527 256 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 ZNF791Q3KP31 576 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 ATPAF1Q5TC12 328 aaPredicted RBP11.43□□□□□ -0.58
LITAF-221ENST00000622633 ARHGAP40Q5TG30 622 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 LYPD4Q6UWN0 246 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 CLEC9AQ6UXN8 241 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 TMPRSS11FQ6ZWK6 438 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 MARCH9Q86YJ5 346 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 HIST1H2BAQ96A08 127 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 RAB3CQ96E17 227 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 IL23AQ9NPF7 189 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 SERGEFQ9UGK8 458 aa11.43□□□□□ -0.58
LITAF-221ENST00000622633 C2orf92A0A1B0GVN3 265 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 TRDV1A0A1B0GX56 115 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 SHISA3A0PJX4 238 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 OR2M5A3KFT3 312 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 IFITM10A6NMD0 228 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 SYT5O00445 386 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 PIP5K1CO60331 668 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 CRYABP02511 175 aaKnown RBP11.42□□□□□ -0.58
LITAF-221ENST00000622633 SNRPCP09234 159 aaKnown RBP11.42□□□□□ -0.58
LITAF-221ENST00000622633 PEPDP12955 493 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 F3P13726 295 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 FGF9P31371 208 aaPredicted RBP11.42□□□□□ -0.58
LITAF-221ENST00000622633 ST3GAL3Q11203 375 aa11.42□□□□□ -0.58
LITAF-221ENST00000622633 GAMTQ14353 236 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms