RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TEKT2Q9UIF3 430 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 DKKL1Q9UK85 242 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 WDFY3Q8IZQ1 3526 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 DOCK10Q96BY6 2186 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 IMPDH2P12268 514 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 CEACAM1P13688 526 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 ITGA3P26006 1051 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 DPP4P27487 766 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 ADH6P28332 368 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 CYB561P49447 251 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 SLC25A1P53007 311 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 FOXK1P85037 733 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 LIPKQ5VXJ0 399 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 ATCAYQ86WG3 371 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 OR6K6Q8NGW6 343 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 SPRYD4Q8WW59 207 aaPredicted RBP19.34■□□□□ 0.69
SPAST-204ENST00000621856 NTNG2Q96CW9 530 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 ZHX1-C8orf76Q96EF9 292 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 TMEM41AQ96HV5 264 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 CNN2Q99439 309 aaKnown RBP19.34■□□□□ 0.69
SPAST-204ENST00000621856 ARHGAP9Q9BRR9 750 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 ZNF649Q9BS31 505 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 ALG8Q9BVK2 526 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 TMEM185BQ9H7F4 350 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 STMN3Q9NZ72 180 aa19.34■□□□□ 0.69
SPAST-204ENST00000621856 CAB39Q9Y376 341 aaPredicted RBP19.34■□□□□ 0.69
SPAST-204ENST00000621856 XKRYO14609 159 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 DIO1P49895 249 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 DSCR4P56555 118 aaPredicted RBP19.33■□□□□ 0.68
SPAST-204ENST00000621856 RPL27P61353 136 aaKnown RBP19.33■□□□□ 0.68
SPAST-204ENST00000621856 ACTC1P68032 377 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 ACTA1P68133 377 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 SELENBP1Q13228 472 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 ABHD17BQ5VST6 288 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 TIGD3Q6B0B8 471 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 C19orf48Q6RUI8 117 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 DTX1Q86Y01 620 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 SCAIQ8N9R8 606 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 POMGNT2Q8NAT1 580 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 ZNF248Q8NDW4 579 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 ALKBH4Q9NXW9 302 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 RPH3AQ9Y2J0 694 aaPredicted RBP19.33■□□□□ 0.68
SPAST-204ENST00000621856 PTPRBP23467 1997 aa19.33■□□□□ 0.68
SPAST-204ENST00000621856 LIPT2A6NK58 231 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 H7C1C5 153 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 ARHGEF9O43307 516 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 OPN1LWP04000 364 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 CPEP16870 476 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 PYCR1P32322 319 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 ACVR1BP36896 505 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 TGFBR1P36897 503 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 DNASE1L1P49184 302 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 RPS3AP61247 264 aaKnown RBP19.32■□□□□ 0.68
SPAST-204ENST00000621856 LCN6P62502 163 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 AIMP2Q13155 320 aaKnown RBP19.32■□□□□ 0.68
SPAST-204ENST00000621856 MYBPHQ13203 477 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 GALEQ14376 348 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 GGTLC2Q14390 218 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 TGIF1Q15583 401 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 ACKR1Q16570 336 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 GLYR1Q49A26 553 aaPredicted RBP19.32■□□□□ 0.68
SPAST-204ENST00000621856 ZNF322Q6U7Q0 402 aaPredicted RBP19.32■□□□□ 0.68
SPAST-204ENST00000621856 H1FNTQ75WM6 255 aaPredicted RBP19.32■□□□□ 0.68
SPAST-204ENST00000621856 ARIH2OSQ8N7S6 290 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 SLC25A43Q8WUT9 341 aaPredicted RBP19.32■□□□□ 0.68
SPAST-204ENST00000621856 TM9SF4Q92544 642 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 UFD1Q92890 307 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 FER1L6-AS2Q96M78 137 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 C5orf34Q96MH7 638 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 TXNIPQ9H3M7 391 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 CHST11Q9NPF2 352 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 NDUFB11Q9NX14 153 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 ABI3Q9P2A4 366 aa19.32■□□□□ 0.68
SPAST-204ENST00000621856 PNMA8CA0A1B0GUJ8 204 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 A0A1W2PRG6 482 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 GLCEO94923 617 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 CASRP41180 1078 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 NAA10P41227 235 aaPredicted RBP19.31■□□□□ 0.68
SPAST-204ENST00000621856 TLE3Q04726 772 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 PUDPQ08623 228 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 PHC2Q8IXK0 858 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 ZNF485Q8NCK3 441 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 ZNRF4Q8WWF5 429 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 NXPE2Q96DL1 559 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 OR5B2Q96R09 309 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 EXOSC4Q9NPD3 245 aaKnown RBP19.31■□□□□ 0.68
SPAST-204ENST00000621856 ASCL3Q9NQ33 180 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 CFAP54Q96N23 3096 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 FAM171A2A8MVW0 826 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 CBR3O75828 277 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 F10P00742 488 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 PSMA1P25786 263 aaKnown RBP19.31■□□□□ 0.68
SPAST-204ENST00000621856 ZP4Q12836 540 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 SOWAHCQ53LP3 525 aaPredicted RBP19.31■□□□□ 0.68
SPAST-204ENST00000621856 RAET1LQ5VY80 246 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 ADCK1Q86TW2 530 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 GTPBP8Q8N3Z3 284 aaPredicted RBP19.31■□□□□ 0.68
SPAST-204ENST00000621856 CLEC1AQ8NC01 280 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 KBTBD8Q8NFY9 601 aa19.31■□□□□ 0.68
SPAST-204ENST00000621856 OR2T4Q8NH00 348 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms