RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 RIPPLY2Q5TAB7 128 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 BTLAQ7Z6A9 289 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 SCAIQ8N9R8 606 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 RELL2Q8NC24 303 aaPredicted RBP12.11□□□□□ -0.47
NEK3-210ENST00000620675 STARD4Q96DR4 205 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 CENPNQ96H22 339 aaPredicted RBP12.11□□□□□ -0.47
NEK3-210ENST00000620675 EMC6Q9BV81 110 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 UCK2Q9BZX2 261 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 SMURF2Q9HAU4 748 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 BCO1Q9HAY6 547 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 SLC5A6Q9Y289 635 aa12.11□□□□□ -0.47
NEK3-210ENST00000620675 IGKV3D-15A0A087WSY6 115 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 MCIDASD6RGH6 385 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 SS18L1O75177 396 aaPredicted RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 PTP4A3O75365 173 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 TP53P04637 393 aaPredicted RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 FCGR2AP12318 317 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 ZNF23P17027 643 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 HOXB6P17509 224 aaKnown RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 SLC16A1P53985 500 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 POU3F1Q03052 451 aaPredicted RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 DBPQ10586 325 aaPredicted RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 MFSD13AQ14CX5 517 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 SF3B4Q15427 424 aaKnown RBP eCLIP12.1□□□□□ -0.47
NEK3-210ENST00000620675 EEF1A1P5Q5VTE0 462 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 SHQ1Q6PI26 577 aaKnown RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 CREB3L2Q70SY1 520 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 MCEMP1Q8IX19 187 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 SLC43A2Q8N370 569 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 LRRC75AQ8NAA5 344 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 STMN2Q93045 179 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 SDCCAG3Q96C92 435 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 GMPPAQ96IJ6 420 aaPredicted RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 PLA2G12AQ9BZM1 189 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 EGLN3Q9H6Z9 239 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 KLHL9Q9P2J3 617 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 NKX1-2Q9UD57 310 aaPredicted RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 HIF3AQ9Y2N7 669 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 UNC119BA6NIH7 251 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 RNF13O43567 381 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 SOX14O95416 240 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 IGHV3-9P01782 118 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 HIST1H2ABP04908 130 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 YES1P07947 543 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 FPR3P25089 353 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 DAPP51397 102 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 MELKQ14680 651 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 RNPS1Q15287 305 aaKnown RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 ZBED5Q49AG3 693 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 TMEM211Q6ICI0 200 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 FAM214BQ7L5A3 538 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 HIST3H2AQ7L7L0 130 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 PQLC1Q8N2U9 271 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 ADPRHL1Q8NDY3 354 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 HIST1H2ACQ93077 130 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 OXGR1Q96P68 337 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 BDH2Q9BUT1 245 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 OPN3Q9H1Y3 402 aaPredicted RBP12.1□□□□□ -0.47
NEK3-210ENST00000620675 TMEM5Q9Y2B1 443 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 ADAM18Q9Y3Q7 739 aa12.1□□□□□ -0.47
NEK3-210ENST00000620675 MITFO75030 526 aaPredicted RBP12.09□□□□□ -0.47
NEK3-210ENST00000620675 FCGR1AP12314 374 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 IFNGR1P15260 489 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 CTSSP25774 331 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 SLC9A3P48764 834 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 SELENOPP49908 381 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 RUNX1T1Q06455 604 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 KLHL17Q6TDP4 642 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 STK32CQ86UX6 486 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 CDK20Q8IZL9 346 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 OR8D4Q8NGM9 314 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 OR5K1Q8NHB7 308 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 GNPDA2Q8TDQ7 276 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 ITLN2Q8WWU7 325 aaPredicted RBP12.09□□□□□ -0.47
NEK3-210ENST00000620675 CIB1Q99828 191 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 RASD1Q9Y272 281 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 CELSR2Q9HCU4 2923 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 HRNRQ86YZ3 2850 aaPredicted RBP12.09□□□□□ -0.47
NEK3-210ENST00000620675 NKX2-6A6NCS4 301 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 CGAP01215 116 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 ANPEPP15144 967 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 ZNF43P17038 809 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 CLDN17P56750 224 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 POU4F3Q15319 338 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 OR2A2Q6IF42 318 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 MRGPRGQ86SM5 289 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 SAMD8Q96LT4 415 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 DGCR6LQ9BY27 220 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 REV1Q9UBZ9 1251 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 PRSS50Q9UI38 385 aa12.09□□□□□ -0.47
NEK3-210ENST00000620675 CADP27708 2225 aa12.08□□□□□ -0.47
NEK3-210ENST00000620675 ABCA4P78363 2273 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 FAM90A27PA6NNH2 459 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 HSPB2A8KAH6 182 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 G3V2T6 193 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 IMPA2O14732 288 aa12.08□□□□□ -0.48
NEK3-210ENST00000620675 SMNDC1O75940 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
NEK3-210ENST00000620675 OR6A2O95222 327 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms