RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 TIMP4Q99727 224 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 SLIRPQ9GZT3 109 aaKnown RBP18.48■□□□□ 0.55
SDHA-220ENST00000617470 OR51V1Q9H2C8 321 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 SH2D2AQ9NP31 389 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 ZNF71Q9NQZ8 489 aaPredicted RBP18.48■□□□□ 0.55
SDHA-220ENST00000617470 NANSQ9NR45 359 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 NDUFB11Q9NX14 153 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 ERVK13-1Q9NX77 482 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 TNFRSF10DQ9UBN6 386 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 CDK2AP1O14519 115 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 TSPAN19P0C672 248 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 GP1BBP13224 206 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 UQCRC1P31930 480 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 KLHL12Q53G59 568 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 POMZP3Q6PJE2 187 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 MDS2Q8NDY4 140 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 SDR9C7Q8NEX9 313 aa18.48■□□□□ 0.55
SDHA-220ENST00000617470 TRMT61AQ96FX7 289 aaKnown RBP18.48■□□□□ 0.55
SDHA-220ENST00000617470 IMPA2O14732 288 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 ARPC3O15145 178 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 LALBAP00709 142 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 GYPBP06028 91 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 SP1P08047 785 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 CPEP16870 476 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 CXCR1P25024 350 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 RPL4P36578 427 aaKnown RBP18.47■□□□□ 0.55
SDHA-220ENST00000617470 CRYBB2P43320 205 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 ERVK-25P63136 954 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 ZNF766Q5HY98 468 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 LIPKQ5VXJ0 399 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 SLC25A25Q6KCM7 469 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 ASB18Q6ZVZ8 466 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 ADGRG3Q86Y34 549 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 MISPQ8IVT2 679 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 C10orf53Q8N6V4 93 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 TMEM99Q8N816 258 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 JSRP1Q96MG2 331 aaPredicted RBP18.47■□□□□ 0.55
SDHA-220ENST00000617470 NPAS1Q99742 590 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 KATNB1Q9BVA0 655 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 MFRPQ9BY79 579 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 CHCHD3Q9NX63 227 aaKnown RBP18.47■□□□□ 0.55
SDHA-220ENST00000617470 PCDHGB7Q9Y5F8 929 aa18.47■□□□□ 0.55
SDHA-220ENST00000617470 SLC22A31A6NKX4 558 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 BLOC1S5-TXNDC5H3BN57 136 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 IFNGP01579 166 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 BGLAPP02818 100 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 PTGDSP41222 190 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 RPS5P46782 204 aaKnown RBP18.46■□□□□ 0.55
SDHA-220ENST00000617470 DNASE1L1P49184 302 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 BMXP51813 675 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 PRPS1P60891 318 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.46■□□□□ 0.555e-7■■■■■ 31.6
SDHA-220ENST00000617470 MOGQ16653 247 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 IGFL3Q6UXB1 125 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 NPEPL1Q8NDH3 523 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 PTDSS2Q9BVG9 487 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 TAS2R10Q9NYW0 307 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 A0A0G2JMM0 328 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 A0A1W2PPB8 328 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 A0A1W2PRS3 328 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 TMEM72A0PK05 275 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 KIR3DP1A8MWS1 328 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 NPIPB7O75200 414 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 ATP6V1E1P36543 226 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 POLR2HP52434 150 aaKnown RBP18.46■□□□□ 0.55
SDHA-220ENST00000617470 C17orf67Q0P5P2 114 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 SNTA1Q13424 505 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 TMED1Q13445 227 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 DGUOKQ16854 277 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 USP43Q70EL4 1123 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 FAM122BQ7Z309 247 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 GALNTL5Q7Z4T8 443 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 OR9Q1Q8NGQ5 310 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 ZPLD1Q8TCW7 415 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 RASD2Q96D21 266 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 DACH2Q96NX9 599 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 ANGPTL4Q9BY76 406 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 ADGRL4Q9HBW9 690 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 ISYNA1Q9NPH2 558 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 PPP4R1LQ9P1A2 415 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 WIF1Q9Y5W5 379 aa18.46■□□□□ 0.55
SDHA-220ENST00000617470 SPIN1Q9Y657 262 aaPredicted RBP18.46■□□□□ 0.55
SDHA-220ENST00000617470 CACNA1GO43497 2377 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 PKD1L2Q7Z442 2459 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 TMED7-TICAM2A0A0A6YYA0 188 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 TRAV17A0A0B4J275 112 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 LRRTM2O43300 516 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 TPBGQ13641 420 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 INPP5JQ15735 1006 aaPredicted RBP18.45■□□□□ 0.54
SDHA-220ENST00000617470 ARMC4Q5T2S8 1044 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 GRINAQ7Z429 371 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 FAM98AQ8NCA5 519 aaKnown RBP18.45■□□□□ 0.54
SDHA-220ENST00000617470 ZNRF4Q8WWF5 429 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 DNAJA3Q96EY1 480 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 SDHAF3Q9NRP4 125 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 DEPPQ9NTK1 212 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 HAO2Q9NYQ3 351 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 KLHL21Q9UJP4 597 aa18.45■□□□□ 0.54
SDHA-220ENST00000617470 KLF13Q9Y2Y9 288 aaPredicted RBP18.45■□□□□ 0.54
SDHA-220ENST00000617470 TMED7Q9Y3B3 224 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms