RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 TMEM234Q8WY98 164 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 SNX18Q96RF0 628 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 MNTQ99583 582 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 WDR77Q9BQA1 342 aaPredicted RBP14.25□□□□□ -0.13
NR1H3-235ENST00000616973 TAS2R5Q9NYW4 299 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 TMEM72A0PK05 275 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 C4orf47A7E2U8 309 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 MAGEB4O15481 346 aaPredicted RBP14.25□□□□□ -0.13
NR1H3-235ENST00000616973 LAMTOR5O43504 91 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 GMFGO60234 142 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 ARL6IP5O75915 188 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 PDGFBP01127 241 aaPredicted RBP14.25□□□□□ -0.13
NR1H3-235ENST00000616973 HOXD12P35452 270 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 RFX2P48378 723 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 DLX5P56178 289 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 RPS11P62280 158 aaKnown RBP eCLIP14.25□□□□□ -0.13
NR1H3-235ENST00000616973 IDNKQ5T6J7 187 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 FAM27D1Q5T7N8 215 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 SFXN4Q6P4A7 337 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 PAPD4Q6PIY7 484 aaKnown RBP14.25□□□□□ -0.13
NR1H3-235ENST00000616973 TMEM205Q6UW68 189 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 UNQ9370/PRO34162Q6UXP9 181 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 TIGD4Q8IY51 512 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 IL17RDQ8NFM7 739 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 OR6S1Q8NH40 331 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 DUSP19Q8WTR2 217 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 HGDQ93099 445 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 TTTY10Q9BZA0 68 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 ZCCHC4Q9H5U6 513 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 ACOXLQ9NUZ1 547 aa14.25□□□□□ -0.13
NR1H3-235ENST00000616973 ZNF346Q9UL40 294 aaKnown RBP14.25□□□□□ -0.13
NR1H3-235ENST00000616973 TRBV2A0A0J9YWF9 115 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 A0A1W2PRG6 482 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 ANKUB1A6NFN9 424 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 SSX4O60224 188 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 SERPINI2O75830 405 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 CFIP05156 583 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 UCHL1P09936 223 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 FGF5P12034 268 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 EDNRAP25101 427 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 C17orf67Q0P5P2 114 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 MRPL28Q13084 256 aaKnown RBP14.24□□□□□ -0.13
NR1H3-235ENST00000616973 COL28A1Q2UY09 1125 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 EEF1A1P5Q5VTE0 462 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 C1orf140Q5VVS0 124 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 C1QL3Q5VWW1 255 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 LYPD4Q6UWN0 246 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 CPEB2Q7Z5Q1 589 aaKnown RBP14.24□□□□□ -0.13
NR1H3-235ENST00000616973 LRRC28Q86X40 367 aaPredicted RBP14.24□□□□□ -0.13
NR1H3-235ENST00000616973 DEFB123Q8N688 67 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 IFI44Q8TCB0 444 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 ST8SIA1Q92185 356 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 RNF31Q96EP0 1072 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 ZC3H10Q96K80 434 aaKnown RBP14.24□□□□□ -0.13
NR1H3-235ENST00000616973 SPSB2Q99619 263 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 SLC22A4Q9H015 551 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.24□□□□□ -0.13
NR1H3-235ENST00000616973 MARCH7Q9H992 704 aa14.24□□□□□ -0.13
NR1H3-235ENST00000616973 ANKRD61A6NGH8 418 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 TMEM200CA6NKL6 621 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 DXOO77932 396 aaKnown RBP14.23□□□□□ -0.13
NR1H3-235ENST00000616973 TACSTD2P09758 323 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 APEX1P27695 318 aaKnown RBP14.23□□□□□ -0.13
NR1H3-235ENST00000616973 POMZP3Q6PJE2 187 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 CDC20BQ86Y33 519 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 MAML2Q8IZL2 1156 aaPredicted RBP14.23□□□□□ -0.13
NR1H3-235ENST00000616973 ZNF511Q8NB15 262 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 OR5L2Q8NGL0 311 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 TTC9Q92623 222 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 HPS1Q92902 700 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 TSSK2Q96PF2 358 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 INIPQ9NRY2 104 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 CYSLTR2Q9NS75 346 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 NPAP1Q9NZP6 1156 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 DCTN6O00399 190 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 OR2T1O43869 369 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 ZNF354AO60765 605 aaPredicted RBP14.23□□□□□ -0.13
NR1H3-235ENST00000616973 TRIM3O75382 744 aaPredicted RBP14.23□□□□□ -0.13
NR1H3-235ENST00000616973 IGHMP01871 453 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 ELK1P19419 428 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 RAB3BP20337 219 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 FBXW4P57775 412 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 CD300CQ08708 224 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 IL11RAQ14626 422 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 OR6V1Q8N148 313 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 CELF2-AS1Q8N7Q2 184 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 OR13C5Q8NGS8 318 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 CEP76Q8TAP6 659 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 MESP1Q9BRJ9 268 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 SRA1Q9HD15 236 aaKnown RBP14.23□□□□□ -0.13
NR1H3-235ENST00000616973 C19orf25Q9UFG5 118 aaPredicted RBP14.23□□□□□ -0.13
NR1H3-235ENST00000616973 RASD1Q9Y272 281 aa14.23□□□□□ -0.13
NR1H3-235ENST00000616973 TRBV11-1A0A0K0K1C0 115 aa14.22□□□□□ -0.13
NR1H3-235ENST00000616973 FAM171A2A8MVW0 826 aa14.22□□□□□ -0.13
NR1H3-235ENST00000616973 WISP1O95388 367 aa14.22□□□□□ -0.13
NR1H3-235ENST00000616973 CER1O95813 267 aa14.22□□□□□ -0.13
NR1H3-235ENST00000616973 DUSP3P51452 185 aaPredicted RBP14.22□□□□□ -0.13
NR1H3-235ENST00000616973 OR10A3P58181 314 aa14.22□□□□□ -0.13
NR1H3-235ENST00000616973 RPL27P61353 136 aaKnown RBP14.22□□□□□ -0.13
NR1H3-235ENST00000616973 TRA2AQ13595 282 aaKnown RBP eCLIP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms