RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 SLC35E2P0CK97 266 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 ELK1P19419 428 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 HTR5AP47898 357 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 ZNF133P52736 654 aaPredicted RBP16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 HOXC5Q00444 222 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 ACSM1Q08AH1 577 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 MARCH8Q5T0T0 291 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 FBXW12Q6X9E4 464 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 ABHD4Q8TB40 342 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 FGF13Q92913 245 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 OBP2BQ9NPH6 170 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 SLC22A11Q9NSA0 550 aa16.15■□□□□ 0.18
HMGXB3-206ENST00000613459 PPP6CO00743 305 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 FBXO24O75426 580 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 CA3P07451 260 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 RGRP47804 291 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 TMEM52BQ4KMG9 183 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 NPSR1Q6W5P4 371 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 SLC25A21Q9BQT8 299 aaPredicted RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 KATNB1Q9BVA0 655 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 GOLGA4Q13439 2230 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 MT-ATP6P00846 226 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 PPT1P50897 306 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 TEKQ02763 1124 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 SMN1Q16637 294 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 FAM26DQ5JW98 314 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 SYT6Q5T7P8 510 aaPredicted RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 OR2G6Q5TZ20 316 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 C18orf63Q68DL7 685 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 LCORQ96JN0 433 aaPredicted RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 OBP2AQ9NY56 170 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 KDM4EB2RXH2 506 aaPredicted RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 HIPK2Q9H2X6 1198 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 STARD5Q9NSY2 213 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 CSO75390 466 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 PIPP12273 146 aaPredicted RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 GAB1Q13480 694 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 RETREG3Q86VR2 466 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 PLPP6Q8IY26 295 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 OR6M1Q8NGM8 313 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 STACQ99469 402 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 GALNT9Q9HCQ5 603 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 RAB22AQ9UL26 194 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 PCDHB10Q9UN67 800 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 MRPS28Q9Y2Q9 187 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 NPFFR2Q9Y5X5 522 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 TOPAZ1Q8N9V7 1692 aa16.14■□□□□ 0.17
HMGXB3-206ENST00000613459 PMS2P2O95744 297 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 SNRPBP14678 240 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 TACR3P29371 465 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 HLA-FP30511 346 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 FAPQ12884 760 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 SQSTM1Q13501 440 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 CAMK2BQ13554 666 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 ZNF266Q14584 549 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 HIST2H3AQ71DI3 136 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 SMIM15Q7Z3B0 74 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 AGBL5Q8NDL9 886 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 MUCL1Q96DR8 90 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 SMCO4Q9NRQ5 59 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 HCFC1R1Q9NWW0 138 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 H3BNC9 293 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 TCRBP04435 133 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 BCKDHBP21953 392 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 ELAVL4P26378 380 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 NAA40Q86UY6 237 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 PLPP5Q8NEB5 264 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 SCARB1Q8WTV0 552 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 MITD1Q8WV92 249 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 IL1F10Q8WWZ1 152 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 UCN3Q969E3 161 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 PUS1Q9Y606 427 aaKnown RBP eCLIP16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 MYH3P11055 1940 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 TMEM200CA6NKL6 621 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 PRICKLE3O43900 615 aaPredicted RBP16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 BMP1P13497 986 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 POU3F3P20264 500 aaPredicted RBP16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 MAGEB1P43366 347 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 RRADP55042 308 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 BTG1P62324 171 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 LGALS14Q8TCE9 139 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 C20orf85Q9H1P6 137 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 FBXL2Q9UKC9 423 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 M6PRP20645 277 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 S100A11P31949 105 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 SSR4P51571 173 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 MTCP1P56278 107 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 ALKBH1Q13686 389 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 AAED1Q7RTV5 226 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 OR2A12Q8NGT7 310 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 CHTF18Q8WVB6 975 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 USB1Q9BQ65 265 aaKnown RBP16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 B3GAT1Q9P2W7 334 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 PAPLNO95428 1278 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 OR8G3PP0DMU2 310 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 FCGR2AP12318 317 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 PSMB5P28074 263 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 HTR4Q13639 388 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 LILRA2Q8N149 483 aa16.13■□□□□ 0.17
HMGXB3-206ENST00000613459 NUDT19A8MXV4 375 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms