RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 AHRRA9YTQ3 701 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 AIREO43918 545 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 OR5F1O95221 314 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 NUDT14O95848 222 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 PEPDP12955 493 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 NID1P14543 1247 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF17P17021 662 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 ADH6P28332 368 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 OPRL1P41146 370 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 EIF1P41567 113 aaKnown RBP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 RGS6P49758 472 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 B3GALT5-AS1P59052 145 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 TAS2R41P59536 307 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 EEF1A1P68104 462 aaKnown RBP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 LSM11P83369 360 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 SRSF1Q07955 248 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 ST3GAL3Q11203 375 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 TSPAN31Q12999 210 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 CBFBQ13951 182 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 GINS1Q14691 196 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 BCL2A1Q16548 175 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 ANKDD1AQ495B1 522 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 EMC4Q5J8M3 183 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 RAET1LQ5VY80 246 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF585AQ6P3V2 769 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 ARSKQ6UWY0 536 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 Q6ZNX1 250 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 RASSF6Q6ZTQ3 369 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 CLIP4Q8N3C7 705 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 GTPBP8Q8N3Z3 284 aaPredicted RBP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 FAM71CQ8NEG0 241 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 OR5M9Q8NGP3 310 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 GPR119Q8TDV5 335 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 RPL3LQ92901 407 aaKnown RBP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 WDYHV1Q96HA8 205 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 IL4I1Q96RQ9 567 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 POLR2J2Q9GZM3 115 aaKnown RBP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 SLIRPQ9GZT3 109 aaKnown RBP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 ARMC7Q9H6L4 198 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 AKIP1Q9NQ31 210 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 EXOSC3Q9NQT5 275 aaKnown RBP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 MED17Q9NVC6 651 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 TNFRSF10DQ9UBN6 386 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF232Q9UNY5 417 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 VDAC3Q9Y277 283 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 MEMO1Q9Y316 297 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 RPL36Q9Y3U8 105 aaKnown RBP7.95□□□□□ -1.14
SMAD4-217ENST00000611848 TENM4Q6N022 2769 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 INTS1Q8N201 2190 aaKnown RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 DOCK7Q96N67 2140 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 CLDN25C9JDP6 229 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 KLF4O43474 513 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 GMFGO60234 142 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 THY1P04216 161 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 DBTP11182 482 aaKnown RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 CPN1P15169 458 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 PGCP20142 388 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 TCEA1P23193 301 aaKnown RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 GADD45AP24522 165 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 IFNA8P32881 189 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 OMPP47874 163 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 SERPINB10P48595 397 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 PCYT1AP49585 367 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 RNF144AP50876 292 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 CCR4P51679 360 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 SMSP52788 366 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 LSM3P62310 102 aaKnown RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 SKP2Q13309 424 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF846Q147U1 533 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 LARS2Q15031 903 aaKnown RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 TMEM44Q2T9K0 475 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 PLPPR5Q32ZL2 321 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 ARMCX4Q5H9R4 360 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 ACSM5Q6NUN0 579 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF836Q6ZNA1 936 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 KIF18BQ86Y91 864 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 TMCO5AQ8N6Q1 288 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 TCEANCQ8N8B7 351 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 OR6Q1Q8NGQ2 317 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 SSC4DQ8WTU2 575 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 S100ZQ8WXG8 99 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 ACOT11Q8WXI4 607 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 ZHX1-C8orf76Q96EF9 292 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 TMEM80Q96HE8 168 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 DMRTA2Q96SC8 542 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 PRR14Q9BWN1 585 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 TAPBPLQ9BX59 468 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 RACGAP1Q9H0H5 632 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 MRPS18AQ9NVS2 196 aaKnown RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 ALKBH4Q9NXW9 302 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 CAMK2AQ9UQM7 478 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 LSM2Q9Y333 95 aaKnown RBP7.94□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF337Q9Y3M9 751 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 CORINQ9Y5Q5 1042 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 A3GALT2U3KPV4 340 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 CACNA1CQ13936 2221 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 MED12LQ86YW9 2145 aa7.94□□□□□ -1.14
SMAD4-217ENST00000611848 PTPN13Q12923 2485 aa7.93□□□□□ -1.14
SMAD4-217ENST00000611848 USP9YO00507 2555 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-217ENST00000611848 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms