RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 NPAP1Q9NZP6 1156 aa12.15□□□□□ -0.46
USP6NL-205ENST00000609104 A8MVM7 634 aa12.15□□□□□ -0.46
USP6NL-205ENST00000609104 AOAHP28039 575 aa12.15□□□□□ -0.46
USP6NL-205ENST00000609104 HTR2CP28335 458 aa12.15□□□□□ -0.46
USP6NL-205ENST00000609104 CBARPQ8N350 705 aaPredicted RBP12.15□□□□□ -0.46
USP6NL-205ENST00000609104 SUMF1Q8NBK3 374 aa12.15□□□□□ -0.46
USP6NL-205ENST00000609104 ZNF480Q8WV37 535 aa12.15□□□□□ -0.46
USP6NL-205ENST00000609104 OR1E3Q8WZA6 343 aa12.15□□□□□ -0.46
USP6NL-205ENST00000609104 TREX1Q9NSU2 369 aa12.15□□□□□ -0.46
USP6NL-205ENST00000609104 NANPQ8TBE9 248 aa12.15□□□□□ -0.47
USP6NL-205ENST00000609104 NIPSNAP3BQ9BS92 247 aa12.15□□□□□ -0.47
USP6NL-205ENST00000609104 MRPL22Q9NWU5 206 aaKnown RBP12.15□□□□□ -0.47
USP6NL-205ENST00000609104 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 TBPL2Q6SJ96 375 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 SLC38A5Q8WUX1 472 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 MAKP20794 623 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 TRHRP34981 398 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-205ENST00000609104 SLC36A2Q495M3 483 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 NTN4Q9HB63 628 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 MRPL33O75394 65 aaKnown RBP12.14□□□□□ -0.47
USP6NL-205ENST00000609104 OR8U8P0C7N1 319 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 SFXN4Q6P4A7 337 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 PRSS45Q7RTY3 260 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 UTP4Q969X6 686 aaKnown RBP12.14□□□□□ -0.47
USP6NL-205ENST00000609104 ZFP92A6NM28 416 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 SLC43A1O75387 559 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 OR6V1Q8N148 313 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 SLC43A2Q8N370 569 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 DHRS4Q9BTZ2 278 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 ALG12Q9BV10 488 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 TGIF2Q9GZN2 237 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 RAB19A4D1S5 217 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 PHLDA2Q53GA4 152 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 TUBB1Q9H4B7 451 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 TEX51A0A1B0GUA7 166 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 AIFM1O95831 613 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 DPP4P27487 766 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 HSD17B7P56937 341 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 SF3B4Q15427 424 aaKnown RBP eCLIP12.14□□□□□ -0.473e-6■■■□□ 14.7
USP6NL-205ENST00000609104 AVPI1Q5T686 147 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 PRICKLE2Q7Z3G6 844 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 SIAH3Q8IW03 269 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 WDR76Q9H967 626 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 BMPR1AP36894 532 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 KCNJ10P78508 379 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 KLF16Q9BXK1 252 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-205ENST00000609104 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 DDAH2O95865 285 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 UBL7Q96S82 380 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-205ENST00000609104 MIA3Q5JRA6 1907 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 SOHLH1Q5JUK2 328 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 GPR160Q9UJ42 338 aa12.14□□□□□ -0.47
USP6NL-205ENST00000609104 M0QYG6 137 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 OR13C7P0DN81 318 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 DEFA4P12838 97 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 RNF113BQ8IZP6 322 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 OR56B1Q8NGI3 324 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 ISG20Q96AZ6 181 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 ZBED3Q96IU2 234 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 MRPS28Q9Y2Q9 187 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 SNX11Q9Y5W9 270 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 LAP3P28838 519 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 FAM122CQ6P4D5 195 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 GAB3Q8WWW8 586 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 TOE1Q96GM8 510 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 RNF170Q96K19 258 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 GINS3Q9BRX5 216 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 OPA3Q9H6K4 179 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 M0QZQ0 153 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 TRAF3IP2O43734 574 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 TMEM176BQ3YBM2 270 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 TRIM61Q5EBN2 209 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 PRAMEF20Q5VT98 475 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 LRIT1Q9P2V4 623 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 CTSAP10619 480 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 ADIRFQ15847 76 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 CACNA1SQ13698 1873 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 PSMB1P20618 241 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 LTB4RQ15722 352 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 LRRC56Q8IYG6 542 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 ASB11Q8WXH4 323 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 ULBP3Q9BZM4 244 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 CD207Q9UJ71 328 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 BOKQ9UMX3 212 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 UGT2A1Q9Y4X1 527 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 EIF4EP06730 217 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 GSTP1P09211 210 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 IMPA1P29218 277 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 POLR2IP36954 125 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 CTSCP53634 463 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 ZNF92Q03936 586 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 LINC00346Q8IVM7 164 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
USP6NL-205ENST00000609104 SMIM14Q96QK8 99 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 TNFRSF13CQ96RJ3 184 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 PSORS1C1Q9UIG5 152 aa12.13□□□□□ -0.47
USP6NL-205ENST00000609104 RGPD1P0DJD0 1748 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms