RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 NHLRC1Q6VVB1 395 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 DEF8Q6ZN54 512 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 ABHD12BQ7Z5M8 362 aaPredicted RBP14.24□□□□□ -0.13
LSM4-206ENST00000600289 OFCC1Q8IZS5 231 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 C17orf78Q8N4C9 275 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 ANKK1Q8NFD2 765 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 OR5J2Q8NH18 312 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 PIK3IP1Q96FE7 263 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 MUS81Q96NY9 551 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 TMEM204Q9BSN7 226 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 NGBQ9NPG2 151 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 UPB1Q9UBR1 384 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 ST6GALNAC2Q9UJ37 374 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 ZNF229Q9UJW7 825 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 RPS6KA6Q9UK32 745 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 A4GNTQ9UNA3 340 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 SERPINA1P01009 418 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 MT-ND1P03886 318 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 IFNW1P05000 195 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 MPGP29372 298 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 SELENOPP49908 381 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 PUDPQ08623 228 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 ZP4Q12836 540 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 PIN1Q13526 163 aaPredicted RBP14.23□□□□□ -0.13
LSM4-206ENST00000600289 GABRA6Q16445 453 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 SAMD4BQ5PRF9 694 aaKnown RBP14.23□□□□□ -0.13
LSM4-206ENST00000600289 PXKQ7Z7A4 578 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 VTCN1Q7Z7D3 282 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 WFDC8Q8IUA0 241 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 NRGNQ92686 78 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 FAM162AQ96A26 154 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 HS6ST2Q96MM7 605 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 FOXC2Q99958 501 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 GORASP2Q9H8Y8 452 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 MEPEQ9NQ76 525 aaPredicted RBP14.23□□□□□ -0.13
LSM4-206ENST00000600289 ADA2Q9NZK5 511 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 CD300AQ9UGN4 299 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 NOX1Q9Y5S8 564 aa14.23□□□□□ -0.13
LSM4-206ENST00000600289 LRRN3E7EW58 273 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 PLPP3O14495 311 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 ZNF682O95780 498 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 HPRP00739 348 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 ASAH2BP0C7U1 165 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 NQO1P15559 274 aaKnown RBP14.22□□□□□ -0.13
LSM4-206ENST00000600289 IFNA8P32881 189 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 TGFBR3Q03167 851 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 ST3GAL3Q11203 375 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 PMS2P3Q13401 168 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 GLYATQ6IB77 296 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 NIPAL3Q6P499 406 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 CXXC5Q7LFL8 322 aaKnown RBP14.22□□□□□ -0.13
LSM4-206ENST00000600289 SLC46A3Q7Z3Q1 461 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 NKAIN4Q8IVV8 208 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 UEVLDQ8IX04 471 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 KDM8Q8N371 416 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 TMEM239Q8WW34 195 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 LIPHQ8WWY8 451 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 MBD6Q96DN6 1003 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 HSH2DQ96JZ2 352 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 HS3ST6Q96QI5 342 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 NANSQ9NR45 359 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 DCAF13Q9NV06 445 aaKnown RBP14.22□□□□□ -0.13
LSM4-206ENST00000600289 MAGEL2Q9UJ55 1249 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 SAMD4AQ9UPU9 718 aaKnown RBP14.22□□□□□ -0.13
LSM4-206ENST00000600289 AKAP6Q13023 2319 aa14.22□□□□□ -0.13
LSM4-206ENST00000600289 CIB4A0PJX0 185 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 ZNF587BE7ETH6 402 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 RPL36A-HNRNPH2H7BZ11 118 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 SLC43A1O75387 559 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 RAD51DO75771 328 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 PRSS23O95084 383 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 CH25HO95992 272 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 RAF1P04049 648 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 TSPAN19P0C672 248 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 NCK1P16333 377 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 PTNP21246 168 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 CBLP22681 906 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 UGT2B15P54855 530 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 FOXG1P55316 489 aaPredicted RBP14.21□□□□□ -0.13
LSM4-206ENST00000600289 SH3BGRP55822 239 aaPredicted RBP14.21□□□□□ -0.13
LSM4-206ENST00000600289 CLDN17P56750 224 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 SLC25A3Q00325 362 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 C1DQ13901 141 aaKnown RBP14.21□□□□□ -0.13
LSM4-206ENST00000600289 PPA1Q15181 289 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 NCMAPQ5T1S8 102 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 TMEM123Q8N131 208 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 C10orf53Q8N6V4 93 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 TMEM255BQ8WV15 326 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 MUCL1Q96DR8 90 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 PLPPR2Q96GM1 343 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 OR2M2Q96R28 347 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 LIME1Q9H400 295 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 ESRP2Q9H6T0 727 aaKnown RBP14.21□□□□□ -0.13
LSM4-206ENST00000600289 EGFL7Q9UHF1 273 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 SLC25A15Q9Y619 301 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 PRR14LQ5THK1 2151 aa14.21□□□□□ -0.13
LSM4-206ENST00000600289 KPNA4O00629 521 aaPredicted RBP14.2□□□□□ -0.14
LSM4-206ENST00000600289 GMNNO75496 209 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 ATE1O95260 518 aa14.2□□□□□ -0.14
LSM4-206ENST00000600289 FOSL1P15407 271 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms