RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 FAM91A1Q658Y4 838 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 H1FNTQ75WM6 255 aaPredicted RBP8.53□□□□□ -1.04
VRK3-216ENST00000599342 RANBP3LQ86VV4 465 aaPredicted RBP8.53□□□□□ -1.04
VRK3-216ENST00000599342 FUNDC1Q8IVP5 155 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 UEVLDQ8IX04 471 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 MSRB3Q8IXL7 192 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 FAM169BQ8N8A8 192 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 ADPRHL1Q8NDY3 354 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 HIPK4Q8NE63 616 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 OR4F15Q8NGB8 312 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 TAAR8Q969N4 342 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 SORCS2Q96PQ0 1159 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 KCNK17Q96T54 332 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 VRK1Q99986 396 aaPredicted RBP8.53□□□□□ -1.04
VRK3-216ENST00000599342 ASPNQ9BXN1 380 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 TMEM38AQ9H6F2 299 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 MYOZ1Q9NP98 299 aaPredicted RBP8.53□□□□□ -1.04
VRK3-216ENST00000599342 SLAMF8Q9P0V8 285 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 KLHL14Q9P2G3 628 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 B3GAT1Q9P2W7 334 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 CRNNQ9UBG3 495 aaPredicted RBP8.53□□□□□ -1.04
VRK3-216ENST00000599342 FBXO9Q9UK97 447 aaPredicted RBP8.53□□□□□ -1.04
VRK3-216ENST00000599342 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 CORINQ9Y5Q5 1042 aa8.53□□□□□ -1.04
VRK3-216ENST00000599342 DNHD1Q96M86 4753 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 IGKV1D-42A0A075B6H8 117 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 A0A087WUJ7 227 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 ZNF99A8MXY4 864 aaPredicted RBP8.52□□□□□ -1.05
VRK3-216ENST00000599342 NDUFS8O00217 210 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 TPST1O60507 370 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 FZD7O75084 574 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 IGKV3-15P01624 115 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 IGLV1-44P01699 117 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 CBR1P16152 277 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 ZNF16P17020 682 aaPredicted RBP8.52□□□□□ -1.05
VRK3-216ENST00000599342 ARR3P36575 388 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 ATP4BP51164 291 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 IDH3GP51553 393 aaPredicted RBP8.52□□□□□ -1.05
VRK3-216ENST00000599342 LSM11P83369 360 aaKnown RBP eCLIP8.52□□□□□ -1.05
VRK3-216ENST00000599342 ARF1P84077 181 aaKnown RBP8.52□□□□□ -1.05
VRK3-216ENST00000599342 NPRL3Q12980 569 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 GGTLC2Q14390 218 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 OR1Q1Q15612 314 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 EFNB3Q15768 340 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 ADIPOQQ15848 244 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 CYP51A1Q16850 503 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 MST1LQ2TV78 715 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 CEACAM16Q2WEN9 425 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 GLIPR1L2Q4G1C9 344 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 CARD17Q5XLA6 110 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 CYB5R2Q6BCY4 276 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 COMTD1Q86VU5 262 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 ARMC8Q8IUR7 673 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 CCDC36Q8IYA8 594 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 C10orf111Q8N326 155 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 C10orf53Q8N6V4 93 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 NUP37Q8NFH4 326 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 OR6S1Q8NH40 331 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 SPATA3Q8NHX4 192 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 NANOS1Q8WY41 292 aaKnown RBP8.52□□□□□ -1.05
VRK3-216ENST00000599342 ATP6V1G3Q96LB4 118 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 OR2M2Q96R28 347 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 RAB1BQ9H0U4 201 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 NELFAQ9H3P2 528 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 RABEP2Q9H5N1 569 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 EVA1AQ9H8M9 152 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 CRLF2Q9HC73 371 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 GPR35Q9HC97 309 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 B3GAT2Q9NPZ5 323 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 LPAR3Q9UBY5 353 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 GMEB1Q9Y692 573 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 CSPG4Q6UVK1 2322 aa8.52□□□□□ -1.05
VRK3-216ENST00000599342 ANK3Q12955 4377 aaKnown RBP8.52□□□□□ -1.05
VRK3-216ENST00000599342 TRBV5-3A0A0A0MS03 114 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 A0A0B4J2E0 115 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 LOC102725191A0A1B0GVB3 256 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 A0A1B0GX12 115 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 RNF212BA8MTL3 300 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 M0R3G1 203 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 ANGPT2O15123 496 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 TRAF3IP2O43734 574 aaPredicted RBP8.51□□□□□ -1.05
VRK3-216ENST00000599342 SEC14L2O76054 403 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 FAM157CP0CG43 387 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 IGHV4-31P0DP07 118 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 APEHP13798 732 aaKnown RBP8.51□□□□□ -1.05
VRK3-216ENST00000599342 GPX2P18283 190 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 AHCYP23526 432 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 CALCRP30988 508 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 NR4A2P43354 598 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 GZMKP49863 264 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 PPOXP50336 477 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 POU3F1Q03052 451 aaPredicted RBP8.51□□□□□ -1.05
VRK3-216ENST00000599342 PUDPQ08623 228 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 PMS2P3Q13401 168 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 IQCCQ4KMZ1 466 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 SWT1Q5T5J6 900 aaKnown RBP8.51□□□□□ -1.05
VRK3-216ENST00000599342 DHDDSQ86SQ9 333 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 MDP1Q86V88 176 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 SNX32Q86XE0 403 aa8.51□□□□□ -1.05
VRK3-216ENST00000599342 ANKS4BQ8N8V4 417 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms