RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FUT1P19526 365 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 GRPRP30550 384 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 EIF1AXP47813 144 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 STARP49675 285 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 DIO1P49895 249 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 LHX2P50458 406 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 AQP4P55087 323 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 CLDN20P56880 219 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 SRYQ05066 204 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 PMS2P3Q13401 168 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 BCL2A1Q16548 175 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 ANKDD1AQ495B1 522 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 ZBED5Q49AG3 693 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 ANKRD34AQ69YU3 496 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 ARHGAP11AQ6P4F7 1023 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 CLEC9AQ6UXN8 241 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 CD300LDQ6UXZ3 194 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 ZNF620Q6ZNG0 422 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 TMPPEQ6ZT21 453 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 RASSF6Q6ZTQ3 369 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 CHMP1BQ7LBR1 199 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 GGNQ86UU5 652 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 GHDCQ8N2G8 530 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 SCAIQ8N9R8 606 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 OR5J2Q8NH18 312 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 OR2V1Q8NHB1 315 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 GPR137Q96N19 417 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 SPRR3Q9UBC9 169 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 TMEFF2Q9UIK5 374 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 CAMK2AQ9UQM7 478 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 TRAPPC4Q9Y296 219 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 CDH10Q9Y6N8 788 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 TLN2Q9Y4G6 2542 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 TRAV27A0A087WT01 109 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 A0A0J9YW62 118 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 A0A1B0GVC2 190 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 OR14I1A6ND48 311 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 FTCDNL1E5RQL4 147 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 LRRN3E7EW58 273 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 H0YJX3 145 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 BLOC1S5-TXNDC5H3BN57 136 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 M0R082 166 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 DNPH1O43598 174 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 EIF1BO60739 113 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 RCBTB2O95199 551 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 ASAH2BP0C7U1 165 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 IMPDH2P12268 514 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 POU1F1P28069 291 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 CLDN18P56856 261 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 CARD18P57730 90 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 PRPS1P60891 318 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 ESRRGP62508 458 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 SGCBQ16585 318 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 ZIK1Q3SY52 487 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC36A3Q495N2 470 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 KRTCAP3Q53RY4 240 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 WLSQ5T9L3 541 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 VASNQ6EMK4 673 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 SMARCD3Q6STE5 483 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 PM20D2Q8IYS1 436 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC43A2Q8N370 569 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 LRRC17Q8N6Y2 441 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 CLDN22Q8N7P3 220 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF555Q8NEP9 628 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 OR51A7Q8NH64 312 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 OR10D3Q8NH80 312 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF417Q8TAU3 575 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 LIPHQ8WWY8 451 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 OSTF1Q92882 214 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 CPNE4Q96A23 557 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 C18orf12Q96KH6 178 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF587Q96SQ5 575 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 GPA33Q99795 319 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 NAA11Q9BSU3 229 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 TEX12Q9BXU0 123 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 GABARAPL3Q9BY60 117 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 TOR3AQ9H497 397 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 PAQR5Q9NXK6 330 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 MRPL39Q9NYK5 338 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 SIGLEC7Q9Y286 467 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 PCNX3Q9H6A9 2034 aa10.77□□□□□ -0.69
SHKBP1-213ENST00000597325 HCFC1P51610 2035 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 A0A1B0GTH9 108 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 BCKDKO14874 412 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 WIPF1O43516 503 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 CXCL13O43927 109 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 NDUFB2O95178 105 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 SYNGR4O95473 234 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 SNAP29O95721 258 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 ADORA3P0DMS8 318 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 SLC6A6P31641 620 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 RPL4P36578 427 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 CRISP1P54107 249 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 RAC3P60763 192 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 RPS4XP62701 263 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 HSF1Q00613 529 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 C3AR1Q16581 482 aa10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 CTU2Q2VPK5 515 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-213ENST00000597325 GXYLT1Q4G148 440 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms