RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 KRCC1Q9NPI7 259 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-221ENST00000593026 ELOVL5Q9NYP7 299 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 TMCC3Q9ULS5 477 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 TMEM5Q9Y2B1 443 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 NOX1Q9Y5S8 564 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 SH3PXD2BA1X283 911 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 EFCAB9A8MZ26 197 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 C11orf98E9PRG8 122 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 BLOC1S5-TXNDC5H3BN57 136 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 TRAF3IP2O43734 574 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-221ENST00000593026 AKAP8O43823 692 aaKnown RBP13.22□□□□□ -0.29
DDX39A-221ENST00000593026 SERPINI2O75830 405 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 IGHV3-9P01782 118 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 HLA-DOBP13765 273 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 MAKP20794 623 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 EDNRAP25101 427 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 COL8A1P27658 744 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 GPR4P46093 362 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 CLDN17P56750 224 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 SORDQ00796 357 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 POU3F1Q03052 451 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-221ENST00000593026 ZP4Q12836 540 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 SEC23BQ15437 767 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 OR2T5Q6IEZ7 315 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 NIPAL3Q6P499 406 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 PXKQ7Z7A4 578 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 MEX3DQ86XN8 651 aaKnown RBP13.22□□□□□ -0.29
DDX39A-221ENST00000593026 UBE2J2Q8N2K1 259 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 OR2T29Q8NH02 315 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 YY1AP1Q9H869 796 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 TAS2R5Q9NYW4 299 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 PRSS50Q9UI38 385 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 RCE1Q9Y256 329 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 LYVE1Q9Y5Y7 322 aa13.22□□□□□ -0.29
DDX39A-221ENST00000593026 PTPN13Q12923 2485 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 TNFRSF11BO00300 401 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 RNF13O43567 381 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 CNOT4O95628 575 aaKnown RBP13.21□□□□□ -0.29
DDX39A-221ENST00000593026 CST1P01037 141 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 COX6B1P14854 86 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 IGFBP2P18065 325 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 PEX19P40855 299 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 AQP2P41181 271 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 LIMS1P48059 325 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 PCYT1AP49585 367 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 RPL18Q07020 188 aaKnown RBP13.21□□□□□ -0.29
DDX39A-221ENST00000593026 FAM27E3Q08E93 113 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 FBXW9Q5XUX1 488 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
DDX39A-221ENST00000593026 Q6ZT83 130 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 TMPRSS11FQ6ZWK6 438 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 OAFQ86UD1 273 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 GABRG1Q8N1C3 465 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 ANKK1Q8NFD2 765 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 FAM46AQ96IP4 442 aaKnown RBP13.21□□□□□ -0.29
DDX39A-221ENST00000593026 ENKD1Q9H0I2 346 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 REEP1Q9H902 201 aa13.21□□□□□ -0.29
DDX39A-221ENST00000593026 UTP20O75691 2785 aaKnown RBP13.21□□□□□ -0.29
DDX39A-221ENST00000593026 OR6C65A6NJZ3 312 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 C16orf97H3BN30 126 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 CDC42EP2O14613 210 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 OR10H3O60404 316 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 FKBP6O75344 327 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 F13BP05160 661 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 UGT2B10P36537 528 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 IFNGR2P38484 337 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 OMPP47874 163 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 SLC9A3P48764 834 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 SELENOPP49908 381 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 HMGA2P52926 109 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 RPS4XP62701 263 aaKnown RBP13.2□□□□□ -0.3
DDX39A-221ENST00000593026 SNTB1Q13884 538 aaKnown RBP13.2□□□□□ -0.3
DDX39A-221ENST00000593026 CCNIQ14094 377 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 P2RY6Q15077 328 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 ANKDD1AQ495B1 522 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 TSPO2Q5TGU0 170 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 STAC2Q6ZMT1 411 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 SLC35D2Q76EJ3 337 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 CXorf67Q86X51 503 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-221ENST00000593026 DMRTC2Q8IXT2 367 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-221ENST00000593026 POMGNT2Q8NAT1 580 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 ACBD4Q8NC06 268 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
DDX39A-221ENST00000593026 OR4C15Q8NGM1 316 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 OR13C2Q8NGS9 318 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 OR51A7Q8NH64 312 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 SPOCK3Q9BQ16 436 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 SLCO5A1Q9H2Y9 848 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 INIPQ9NRY2 104 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 SLC7A10Q9NS82 523 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 CCM2LQ9NUG4 571 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-221ENST00000593026 ASB6Q9NWX5 421 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 MED29Q9NX70 200 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 UPB1Q9UBR1 384 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 MALT1Q9UDY8 824 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 HIF3AQ9Y2N7 669 aa13.2□□□□□ -0.3
DDX39A-221ENST00000593026 SAMHD1Q9Y3Z3 626 aaKnown RBP13.2□□□□□ -0.3
DDX39A-221ENST00000593026 TRAV27A0A087WT01 109 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 A0A1W2PRG6 482 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 GNGT2O14610 69 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms