RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 MTRF1LQ9UGC7 380 aaKnown RBP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 PEX16Q9Y5Y5 336 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 MAST4O15021 2626 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 PPIAL4EA0A075B759 164 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 WI2-2373I1.2A0A1W2PRP0 233 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 ARHGEF35A5YM69 484 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 BTBD17A6NE02 478 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 GJE1A6NN92 205 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 FAM189A1O60320 539 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 OR7A10O76100 309 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 KRT6AP02538 564 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 MMP1P03956 469 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 CHTF8P0CG12 524 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 PPIAL4FP0DN26 164 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 NR2C1P13056 603 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 ICAM2P13598 275 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 ATP1B2P14415 290 aaPredicted RBP2.33□□□□□ -2.04
SMAD4-207ENST00000589076 ETS2P15036 469 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 HPGDP15428 266 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 FMO3P31513 532 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 NUDT1P36639 197 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 CTRLP40313 264 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 VHLP40337 213 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 ACTR3P61158 418 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 DAZ2Q13117 558 aaKnown RBP2.33□□□□□ -2.04
SMAD4-207ENST00000589076 ZNF630Q2M218 657 aaPredicted RBP2.33□□□□□ -2.04
SMAD4-207ENST00000589076 C2orf83Q53S99 150 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 PAGE3Q5JUK9 113 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 UQCC3Q6UW78 93 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 ZNF620Q6ZNG0 422 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 LRRC74BQ6ZQY2 392 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 RFLNAQ6ZTI6 216 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 TAS2R42Q7RTR8 314 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 RNF175Q8N4F7 328 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 ACOT4Q8N9L9 421 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 OR9G1Q8NH87 305 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 FAM110BQ8TC76 370 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 FGF14Q92915 247 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 MYDGFQ969H8 173 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 RPUSD4Q96CM3 377 aaKnown RBP2.33□□□□□ -2.04
SMAD4-207ENST00000589076 FCRL1Q96LA6 429 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 MBOAT4Q96T53 435 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 FMO2Q99518 471 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 RASL11BQ9BPW5 248 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 TMEM246Q9BRR3 403 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 TCHPQ9BT92 498 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 CHRDL1Q9BU40 450 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 FAIM2Q9BWQ8 316 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 RNF167Q9H6Y7 350 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 LY9Q9HBG7 655 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 NT5MQ9NPB1 228 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 DAZ3Q9NR90 486 aaKnown RBP2.33□□□□□ -2.04
SMAD4-207ENST00000589076 IKZF2Q9UKS7 526 aa2.33□□□□□ -2.04
SMAD4-207ENST00000589076 A0A0G2JN53 185 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 A0A1B0GUA9 196 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 A0A1W2PPE3 182 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 XKRY2A2RUG3 117 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 PINLYPA6NC86 204 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 C12orf71A8MTZ7 269 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 UBXN8O00124 270 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 MGRN1O60291 552 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 KLF8O95600 359 aaPredicted RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 SERPINA3P01011 423 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 FGF1P05230 155 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 IGHV4-34P06331 123 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 MCF2P10911 925 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 RPS2P15880 293 aaKnown RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 CCNE1P24864 410 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 CASP14P31944 242 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 CRYBB2P43320 205 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 YAP1P46937 504 aaKnown RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 CSNK1DP48730 415 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 LRRC74AQ0VAA2 488 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 PDIA2Q13087 525 aaKnown RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 GK3PQ14409 553 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 KCTD21Q4G0X4 260 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 C1orf94Q6P1W5 598 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 KDM7AQ6ZMT4 941 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 ZNF546Q86UE3 836 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 RALGPS2Q86X27 583 aaPredicted RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 EGFL6Q8IUX8 553 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 MFSD6LQ8IWD5 586 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 PIANPQ8IYJ0 282 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 OR9K2Q8NGE7 335 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 OR1L6Q8NGR2 347 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 SLC2A14Q8TDB8 520 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 NDRG1Q92597 394 aaKnown RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 ARPC1AQ92747 370 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 TUBGCP3Q96CW5 907 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 PANX2Q96RD6 677 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 PELOQ9BRX2 385 aaKnown RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 NXF3Q9H4D5 531 aaKnown RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 SIAEQ9HAT2 523 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 MRPL47Q9HD33 250 aaKnown RBP2.32□□□□□ -2.04
SMAD4-207ENST00000589076 ETNK2Q9NVF9 386 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 EXD2Q9NVH0 621 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 QPCTLQ9NXS2 382 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 CLCF1Q9UBD9 225 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 MMP17Q9ULZ9 603 aa2.32□□□□□ -2.04
SMAD4-207ENST00000589076 SLC25A15Q9Y619 301 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms