RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 HMBOX1Q6NT76 420 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 ERICH5Q6P6B1 374 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 LINC00114Q6XXX2 140 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 CALHM3Q86XJ0 350 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 UEVLDQ8IX04 471 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 PIK3C3Q8NEB9 887 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 OR6T1Q8NGN1 323 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 MAGEE2Q8TD90 523 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-208ENST00000588692 DHRS9Q9BPW9 319 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 PCDHAC1Q9H158 963 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 FKRPQ9H9S5 495 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 GID8Q9NWU2 228 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 MRPL39Q9NYK5 338 aaKnown RBP12.65□□□□□ -0.38
DDX39A-208ENST00000588692 CAPN7Q9Y6W3 813 aa12.65□□□□□ -0.38
DDX39A-208ENST00000588692 HEATR1Q9H583 2144 aaKnown RBP12.64□□□□□ -0.39
DDX39A-208ENST00000588692 NIPBLQ6KC79 2804 aaeCLIP12.64□□□□□ -0.392e-7■□□□□ 8.1
DDX39A-208ENST00000588692 ZFHX3Q15911 3703 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 ARPC4-TTLL3A0A0A6YYG9 625 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 TRAF3IP2O43734 574 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-208ENST00000588692 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-208ENST00000588692 IL1RL1Q01638 556 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 ROR2Q01974 943 aaKnown RBP12.64□□□□□ -0.39
DDX39A-208ENST00000588692 LGALS3BPQ08380 585 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 SPOCK1Q08629 439 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 ENTPD8Q5MY95 495 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 ANKRD16Q6P6B7 361 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 SNX32Q86XE0 403 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 GPR137CQ8N3F9 429 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 ADAMTS16Q8TE57 1224 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 MPP4Q96JB8 637 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 C1QTNF6Q9BXI9 259 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 BAG5Q9UL15 447 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 NOX1Q9Y5S8 564 aa12.64□□□□□ -0.39
DDX39A-208ENST00000588692 NSD1Q96L73 2696 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-208ENST00000588692 TRAPPC13A5PLN9 417 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 TRIM64A6NGJ6 449 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 TRIM64BA6NI03 449 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 CPSF4LA6NMK7 179 aaKnown RBP12.63□□□□□ -0.39
DDX39A-208ENST00000588692 E7EQL1 145 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 MS4A18H0YCH9 400 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 CD8AP01732 235 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 HEXAP06865 529 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 CBLP22681 906 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 TTKP33981 857 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 CDKN1AP38936 164 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 MDH1P40925 334 aaKnown RBP12.63□□□□□ -0.39
DDX39A-208ENST00000588692 CRYBA2P53672 197 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 UBE2NP61088 152 aaKnown RBP12.63□□□□□ -0.39
DDX39A-208ENST00000588692 LTBQ06643 244 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 PUDPQ08623 228 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 PMS2P3Q13401 168 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 MS4A18Q3C1V0 323 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 C3orf36Q3SXR2 165 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 CLEC9AQ6UXN8 241 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 LINGO2Q7L985 606 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 C10orf53Q8N6V4 93 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 VANGL1Q8TAA9 524 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-208ENST00000588692 PROX1Q92786 737 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 BCL2L2Q92843 193 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-208ENST00000588692 MOGAT1Q96PD6 335 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 OR2M2Q96R28 347 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 SLC19A3Q9BZV2 496 aa12.63□□□□□ -0.39
DDX39A-208ENST00000588692 BARX1Q9HBU1 254 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-208ENST00000588692 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 KRT34O76011 436 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 IFNA14P01570 189 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 POU3F1Q03052 451 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-208ENST00000588692 SF3A3Q12874 501 aaKnown RBP eCLIP12.62□□□□□ -0.394e-6■■■■■ 26.8
DDX39A-208ENST00000588692 TTC33Q6PID6 262 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-208ENST00000588692 ARPINQ7Z6K5 226 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 PXKQ7Z7A4 578 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 TMEM123Q8N131 208 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 FBXL14Q8N1E6 418 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 MUC15Q8N387 334 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 OR4D11Q8NGI4 311 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 OR5J2Q8NH18 312 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 C10orf82Q8WW14 230 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 ZNF583Q96ND8 569 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 SLC38A2Q96QD8 506 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 SMR3AQ99954 134 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 POLR2J2Q9GZM3 115 aaKnown RBP12.62□□□□□ -0.39
DDX39A-208ENST00000588692 POLR2J3Q9H1A7 115 aaKnown RBP12.62□□□□□ -0.39
DDX39A-208ENST00000588692 GPR35Q9HC97 309 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 CBLN4Q9NTU7 201 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 AP3M1Q9Y2T2 418 aa12.62□□□□□ -0.39
DDX39A-208ENST00000588692 FAM220BPB1ANY3 271 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 HPRP00739 348 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 CLEC12BQ2HXU8 276 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 B3GLCTQ6Y288 498 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 RBM45Q8IUH3 476 aaKnown RBP12.61□□□□□ -0.39
DDX39A-208ENST00000588692 CCDC36Q8IYA8 594 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 CIARTQ8N365 385 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-208ENST00000588692 FAM169BQ8N8A8 192 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 RP9Q8TA86 221 aaKnown RBP12.61□□□□□ -0.39
DDX39A-208ENST00000588692 LRR1Q96L50 414 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 HS6ST2Q96MM7 605 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 KCNS3Q9BQ31 491 aa12.61□□□□□ -0.39
DDX39A-208ENST00000588692 ZNF426Q9BUY5 554 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms