RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 TMEM211Q6ICI0 200 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 Q6ZPB1 254 aaPredicted RBP11.57□□□□□ -0.56
TRIM47-202ENST00000585333 GPAT4Q86UL3 456 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 LNX2Q8N448 690 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 TMEM99Q8N816 258 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 RNF128Q8TEB7 428 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 NRG4Q8WWG1 115 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 HRASLS5Q96KN8 279 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF570Q96NI8 536 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 SNX18Q96RF0 628 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 TNFRSF13CQ96RJ3 184 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 ADI1Q9BV57 179 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 GRIP2Q9C0E4 1043 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 TXNIPQ9H3M7 391 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 TOR3AQ9H497 397 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 MCCC2Q9HCC0 563 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 NRIP3Q9NQ35 241 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 REV1Q9UBZ9 1251 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 RCE1Q9Y256 329 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 PCNX3Q9H6A9 2034 aa11.57□□□□□ -0.56
TRIM47-202ENST00000585333 SPTA1P02549 2419 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 IGKV3D-15A0A087WSY6 115 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 LOC100130705A0A1B0GUX0 176 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF726A6NNF4 738 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ZAR1LA6NP61 321 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF724A8MTY0 619 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 SMAD9O15198 467 aaKnown RBP11.56□□□□□ -0.56
TRIM47-202ENST00000585333 SLC19A2O60779 497 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 SOX14O95416 240 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 OPN1LWP04000 364 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF3P17036 446 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 FUT4P22083 530 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ACVR2AP27037 513 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 SDHAP31040 664 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 CAPGP40121 348 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 AQP2P41181 271 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 CTXN1P60606 82 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 RPL27P61353 136 aaKnown RBP11.56□□□□□ -0.56
TRIM47-202ENST00000585333 LSM11P83369 360 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRIM47-202ENST00000585333 HSF1Q00613 529 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 POU3F1Q03052 451 aaPredicted RBP11.56□□□□□ -0.56
TRIM47-202ENST00000585333 LTBQ06643 244 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 RASGEF1BQ0VAM2 473 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 PTGES3Q15185 160 aaKnown RBP11.56□□□□□ -0.56
TRIM47-202ENST00000585333 PGGHGQ32M88 737 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ACSF3Q4G176 576 aaPredicted RBP11.56□□□□□ -0.56
TRIM47-202ENST00000585333 TMEM201Q5SNT2 666 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 C1orf185Q5T7R7 199 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF585AQ6P3V2 769 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 MTFR2Q6P444 385 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 PCSK4Q6UW60 755 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 B3GNT6Q6ZMB0 384 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ADGRE4PQ86SQ3 457 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 JAZF1Q86VZ6 243 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ATCAYQ86WG3 371 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 LRRC17Q8N6Y2 441 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 CYGBQ8WWM9 190 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 INTS12Q96CB8 462 aaKnown RBP11.56□□□□□ -0.56
TRIM47-202ENST00000585333 GMPPAQ96IJ6 420 aaPredicted RBP11.56□□□□□ -0.56
TRIM47-202ENST00000585333 SAMD8Q96LT4 415 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 GPA33Q99795 319 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 TUBA1CQ9BQE3 449 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 FAM118AQ9NWS6 357 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 TAS2R5Q9NYW4 299 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 ZNF835Q9Y2P0 537 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 EMC9Q9Y3B6 208 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 GMPPBQ9Y5P6 360 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 IGSF10Q6WRI0 2623 aa11.56□□□□□ -0.56
TRIM47-202ENST00000585333 NCKAP5O14513 1909 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 LRRN3E7EW58 273 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 C11orf98E9PRG8 122 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 WISP1O95388 367 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 SNAP29O95721 258 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 TXNDC12O95881 172 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 RENP00797 406 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 IL2RAP01589 272 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 CENPAP49450 140 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 AQP4P55087 323 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 PER3P56645 1201 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 CDK5Q00535 292 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 MYBPC1Q00872 1141 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 ITGADQ13349 1161 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 GINS1Q14691 196 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 SLC17A1Q14916 467 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 SLX4IPQ5VYV7 408 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 SLC35D2Q76EJ3 337 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 ABHD12BQ7Z5M8 362 aaPredicted RBP11.55□□□□□ -0.56
TRIM47-202ENST00000585333 CD163Q86VB7 1156 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 ARIH2OSQ8N7S6 290 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 OR9K2Q8NGE7 335 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 OR8J1Q8NGP2 316 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 TMEM45BQ96B21 275 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 Q96MT0 163 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 ERMAPQ96PL5 475 aaPredicted RBP11.55□□□□□ -0.56
TRIM47-202ENST00000585333 TRIB1Q96RU8 372 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 PITX2Q99697 317 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 KATNB1Q9BVA0 655 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 SRXN1Q9BYN0 137 aa11.55□□□□□ -0.56
TRIM47-202ENST00000585333 FN3KQ9H479 309 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms