RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SLC13A4Q9UKG4 626 aa9.72□□□□□ -0.85
CCDC47-206ENST00000584112 TRBV5-3A0A0A0MS03 114 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 FTCDNL1E5RQL4 147 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 AIM2O14862 343 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 AKAP8O43823 692 aaKnown RBP9.71□□□□□ -0.86
CCDC47-206ENST00000584112 NDUFS7O75251 213 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 SERPINB7O75635 380 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 IGHV4-31P0DP07 118 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 PNMTP11086 282 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 BMP4P12644 408 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF43P17038 809 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 GPX2P18283 190 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 CDH2P19022 906 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-206ENST00000584112 SLC6A2P23975 617 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 RPS5P46782 204 aaKnown RBP9.71□□□□□ -0.86
CCDC47-206ENST00000584112 SELENOPP49908 381 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 SH3BGRP55822 239 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-206ENST00000584112 HOXC5Q00444 222 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 EGR4Q05215 589 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 SPOCK1Q08629 439 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 SCARB2Q14108 478 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 MFSD13AQ14CX5 517 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 PAGE3Q5JUK9 113 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 FAM69AQ5T7M9 428 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 FAM91A1Q658Y4 838 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 CYB5R2Q6BCY4 276 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 C11orf71Q6IPW1 123 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 NIPAL3Q6P499 406 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 HDXQ7Z353 690 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 MSRB3Q8IXL7 192 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 C1QTNF6Q9BXI9 259 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 CACNG6Q9BXT2 260 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 TMEM38AQ9H6F2 299 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 MOV10Q9HCE1 1003 aaKnown RBP9.71□□□□□ -0.86
CCDC47-206ENST00000584112 ARGLU1Q9NWB6 273 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-206ENST00000584112 SLAMF8Q9P0V8 285 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 TESQ9UGI8 421 aaKnown RBP9.71□□□□□ -0.86
CCDC47-206ENST00000584112 TRIM33Q9UPN9 1127 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 RCE1Q9Y256 329 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 B3GALT5Q9Y2C3 310 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 ATP23Q9Y6H3 246 aa9.71□□□□□ -0.86
CCDC47-206ENST00000584112 TRAV36DV7A0A075B6V5 113 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 A0A1B0GWA3 101 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 SSX4O60224 188 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 FZD7O75084 574 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 HOXB1P14653 301 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 APOBEC3AP31941 199 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 NUDT6P53370 316 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 RGS8P57771 180 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 DSCR9P59020 149 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 UBE2NP61088 152 aaKnown RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 SLC25A3Q00325 362 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 CHRNB3Q05901 458 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 RAB35Q15286 201 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 TBRG1Q3YBR2 411 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 ALG10BQ5I7T1 473 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 ULK3Q6PHR2 472 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 CLEC2AQ6UVW9 174 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 NET1Q7Z628 596 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 RANBP3LQ86VV4 465 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 EPHX4Q8IUS5 362 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 ZNF454Q8N9F8 522 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 HIPK4Q8NE63 616 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 ANKK1Q8NFD2 765 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 SEMA6DQ8NFY4 1073 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 OR1K1Q8NGR3 316 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 KTI12Q96EK9 354 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 SLC47A1Q96FL8 570 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 MAGEB18Q96M61 343 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 OXGR1Q96P68 337 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 ALKBH3Q96Q83 286 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 EPYCQ99645 322 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 KCNS3Q9BQ31 491 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 SIKE1Q9BRV8 207 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 RHNO1Q9BSD3 238 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 PTDSS2Q9BVG9 487 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 LINC00470Q9BZP3 86 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 VIPAS39Q9H9C1 493 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 TMEM27Q9HBJ8 222 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 SLC52A3Q9NQ40 469 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 LEF1Q9UJU2 399 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 GDF2Q9UK05 429 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-206ENST00000584112 ANGPT4Q9Y264 503 aa9.7□□□□□ -0.86
CCDC47-206ENST00000584112 ARPC4-TTLL3A0A0A6YYG9 625 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 FAM157AC9JC47 383 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 H7C417 338 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 ANGPT2O15123 496 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 SLC43A1O75387 559 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 LGI1O95970 557 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 PTNP21246 168 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 CLDN17P56750 224 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 C1DQ13901 141 aaKnown RBP9.69□□□□□ -0.86
CCDC47-206ENST00000584112 HIKESHIQ53FT3 197 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 AWAT1Q58HT5 328 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 B3GLCTQ6Y288 498 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 DHDDSQ86SQ9 333 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 LSRQ86X29 649 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-206ENST00000584112 ARMC8Q8IUR7 673 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 C10orf111Q8N326 155 aa9.69□□□□□ -0.86
CCDC47-206ENST00000584112 C11orf65Q8NCR3 313 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms