RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 MID2Q9UJV3 735 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 ZNF346Q9UL40 294 aaKnown RBP10.9□□□□□ -0.66
SS18-219ENST00000581570 RCE1Q9Y256 329 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 A0A1W2PPW3 197 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 COPEO14579 308 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 CDC14BO60729 498 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 DEAF1O75398 565 aaPredicted RBP10.89□□□□□ -0.67
SS18-219ENST00000581570 SEC14L2O76054 403 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 FSHBP01225 129 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 HLA-HP01893 362 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 TFPTP0C1Z6 253 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 CD79AP11912 226 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 IL7RP16871 459 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 GATA3P23771 443 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 MAGEB1P43366 347 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 RPS23P62266 143 aaKnown RBP10.89□□□□□ -0.67
SS18-219ENST00000581570 IL13RA1P78552 427 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 GALK2Q01415 458 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 PCLAFQ15004 111 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 SYPL1Q16563 259 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 GSG1Q2KHT4 349 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 ALKBH6Q3KRA9 238 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 GLIPR1L2Q4G1C9 344 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 MRPL2Q5T653 305 aaKnown RBP10.89□□□□□ -0.67
SS18-219ENST00000581570 SAXO2Q658L1 398 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 ZNF440Q8IYI8 595 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 CADM2Q8N3J6 435 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 ANKFN1Q8N957 763 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 AGR3Q8TD06 166 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 DVL3Q92997 716 aaPredicted RBP10.89□□□□□ -0.67
SS18-219ENST00000581570 LRRC58Q96CX6 371 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 TRNT1Q96Q11 434 aaKnown RBP10.89□□□□□ -0.67
SS18-219ENST00000581570 DPY30Q9C005 99 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 SLC38A1Q9H2H9 487 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 MTHFD2LQ9H903 347 aaPredicted RBP10.89□□□□□ -0.67
SS18-219ENST00000581570 MED29Q9NX70 200 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 ARMCX1Q9P291 453 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 MARCOQ9UEW3 520 aaPredicted RBP10.89□□□□□ -0.67
SS18-219ENST00000581570 OPN4Q9UHM6 478 aa10.89□□□□□ -0.67
SS18-219ENST00000581570 ZNF99A8MXY4 864 aaPredicted RBP10.88□□□□□ -0.67
SS18-219ENST00000581570 HMGN4O00479 90 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 NPHS1O60500 1241 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 IGHV2-5P01817 119 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 NUDT17P0C025 328 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 GKN3PP0CG01 181 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 PNMTP11086 282 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 ZNF14P17017 642 aaPredicted RBP10.88□□□□□ -0.67
SS18-219ENST00000581570 CHI3L1P36222 383 aaPredicted RBP10.88□□□□□ -0.67
SS18-219ENST00000581570 COPZ1P61923 177 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 PIGFQ07326 219 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 C1DQ13901 141 aaKnown RBP10.88□□□□□ -0.67
SS18-219ENST00000581570 FXNQ16595 210 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 WBP2NLQ6ICG8 309 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 LRRC74BQ6ZQY2 392 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 DOK3Q7L591 496 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 ANKRD46Q86W74 232 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 TREML1Q86YW5 311 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 PIK3C3Q8NEB9 887 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 MFSD8Q8NHS3 518 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 MGARPQ8TDB4 240 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 SLC25A36Q96CQ1 311 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 TUBGCP3Q96CW5 907 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 NEURL3Q96EH8 262 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 SLITRK2Q9H156 845 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 ZMAT3Q9HA38 289 aaKnown RBP10.88□□□□□ -0.67
SS18-219ENST00000581570 RLIMQ9NVW2 624 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 PRDM4Q9UKN5 801 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 ZNF281Q9Y2X9 895 aa10.88□□□□□ -0.67
SS18-219ENST00000581570 PRSS51A0A1B0GVH4 220 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 DNAJC9-AS1A6NH13 148 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 C3orf80F5H4A9 247 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 M0R3G1 203 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 NPIPB7O75200 414 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 AHSA1O95433 338 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 DBIP07108 87 aaKnown RBP10.87□□□□□ -0.67
SS18-219ENST00000581570 RPS4Y1P22090 263 aaKnown RBP10.87□□□□□ -0.67
SS18-219ENST00000581570 GTF2E2P29084 291 aaKnown RBP10.87□□□□□ -0.67
SS18-219ENST00000581570 ACAA2P42765 397 aaKnown RBP10.87□□□□□ -0.67
SS18-219ENST00000581570 RAD52P43351 418 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 CCL8P80075 99 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 TEKQ02763 1124 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 MAD2L1Q13257 205 aaPredicted RBP10.87□□□□□ -0.67
SS18-219ENST00000581570 OCLNQ16625 522 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 NKPD1Q17RQ9 610 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 MMEL1Q495T6 779 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 NOA1Q8NC60 698 aaKnown RBP10.87□□□□□ -0.67
SS18-219ENST00000581570 VPS37AQ8NEZ2 397 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 OR8J2Q8NGG1 315 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 STK35Q8TDR2 534 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 ZNF75AQ96N20 296 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 OXGR1Q96P68 337 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 SLC35A5Q9BS91 424 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 TAAR3PQ9P1P4 343 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 ZDHHC2Q9UIJ5 367 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 GPR160Q9UJ42 338 aa10.87□□□□□ -0.67
SS18-219ENST00000581570 CMYA5Q8N3K9 4069 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 A0A096LPI6 279 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 C17orf100A8MU93 164 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 FTCDNL1E5RQL4 147 aa10.86□□□□□ -0.67
SS18-219ENST00000581570 C1QCP02747 245 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms