RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 UBE2J2Q8N2K1 259 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 TPRX1Q8N7U7 411 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 SDR9C7Q8NEX9 313 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 PLEKHA8Q96JA3 519 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 SLC35E1Q96K37 410 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 IFT74Q96LB3 600 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 CNN2Q99439 309 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 NRIP2Q9BQI9 281 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 TMEM246Q9BRR3 403 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 OR11A1Q9GZK7 315 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 ANKRD19PQ9H560 264 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 IL26Q9NPH9 171 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 SLC7A8Q9UHI5 535 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 SLC25A15Q9Y619 301 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 IGLV3-22A0A075B6J6 115 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 TRIM49D1C9J1S8 452 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 KRTAP4-16G5E9R7 235 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 MOSP00540 346 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 IGHV4-34P06331 123 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF133P52736 654 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 ACTR3P61158 418 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 GNMTQ14749 295 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 CTRB2Q6GPI1 263 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 ACP7Q6ZNF0 438 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 RUFY3Q7L099 469 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 THOC6Q86W42 341 aaKnown RBP3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 PIANPQ8IYJ0 282 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 LINC01555Q8NAE3 123 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 ACOT11Q8WXI4 607 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 N4BP2L2Q92802 583 aaPredicted RBP3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 MS4A4EQ96PG1 132 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 NRTNQ99748 197 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 FAIM2Q9BWQ8 316 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 HES7Q9BYE0 225 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 NIPAL2Q9H841 368 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 METTL7AQ9H8H3 244 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 LY9Q9HBG7 655 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 CACNG2Q9Y698 323 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 LTBP1Q14766 1721 aa3.13□□□□□ -1.91
SMCHD1-205ENST00000581383 C12orf77C9JDV5 145 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 PALMO75781 387 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 OR7A10O76100 309 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 SNX4O95219 450 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 NR2C1P13056 603 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 RCC1P18754 421 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 CMA1P23946 247 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 SH3BGRP55822 239 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 ACVR1Q04771 509 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF77Q15935 545 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 PRAMEF5Q5TYX0 476 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 PRAMEF6Q5VXH4 476 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 C6orf89Q6UWU4 347 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 C19orf35Q6ZS72 473 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 RNF175Q8N4F7 328 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 FAM71E2Q8N5Q1 922 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 SMARCD2Q92925 531 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 CHRDL1Q9BU40 450 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 RIOK2Q9BVS4 552 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 SRMSQ9H3Y6 488 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 EML4Q9HC35 981 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 CCL28Q9NRJ3 127 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 CALYQ9NYX4 217 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 CLCF1Q9UBD9 225 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF225Q9UK10 706 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 IKBKGQ9Y6K9 419 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 FANCIQ9NVI1 1328 aa3.12□□□□□ -1.91
SMCHD1-205ENST00000581383 A0A0G2JN53 185 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 A0A1B0GUA9 196 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 A0A1W2PPE3 182 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 A0A1W2PPV9 198 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 PINLYPA6NC86 204 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 CCDC182A6NF36 153 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 C12orf71A8MTZ7 269 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 KRT6AP02538 564 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 CCNCP24863 283 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 PBLDP30039 288 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 ERVK-25P63136 954 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 REG3AQ06141 175 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 PPIL2Q13356 520 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 GPNMBQ14956 572 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 CYTH1Q15438 398 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF530Q6P9A1 599 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 KDM7AQ6ZMT4 941 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 LRRC74BQ6ZQY2 392 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 Q6ZVH6 145 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 NANOGNBQ7Z5D8 188 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 SLC22A9Q8IVM8 553 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 NECAB1Q8N987 351 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 OR4F6Q8NGB9 312 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 OR9K2Q8NGE7 335 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 ACER1Q8TDN7 264 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 FGF14Q92915 247 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 ZFP14Q9HCL3 533 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 NT5MQ9NPB1 228 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 ADAP2Q9NPF8 381 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 ETNK2Q9NVF9 386 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 N6AMT1Q9Y5N5 214 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 PEX16Q9Y5Y5 336 aa3.11□□□□□ -1.91
SMCHD1-205ENST00000581383 SCN2AQ99250 2005 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms