RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ANKDD1AQ495B1 522 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 C1orf94Q6P1W5 598 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 KIR2DL5AQ8N109 375 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 FNDC5Q8NAU1 212 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 OR52M1Q8NGK5 317 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 KIR2DL5BQ8NHK3 375 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 ZSCAN5AQ9BUG6 496 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 CAPS2Q9BXY5 557 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 RANBP3Q9H6Z4 567 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 SMOXQ9NWM0 555 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 ATAD2BQ9ULI0 1458 aa2.71□□□□□ -1.98
SMCHD1-204ENST00000581226 FANCIQ9NVI1 1328 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 HSD17B6O14756 317 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 SLC31A2O15432 143 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 RAMP3O60896 148 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 SPAG7O75391 227 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 SUPT3HO75486 399 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 CCR1P32246 355 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 TFPI2P48307 235 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 HNMTP50135 292 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 REG3AQ06141 175 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 EIF4EBP1Q13541 118 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 OR5I1Q13606 314 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 TMEM183BQ1AE95 376 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 SFT2D3Q587I9 215 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 TMEM255AQ5JRV8 349 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 OR4F3Q6IEY1 312 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 THOC6Q86W42 341 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 PLA2G4DQ86XP0 818 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 TMEM183AQ8IXX5 376 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 MFSD9Q8NBP5 474 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 OR1N2Q8NGR9 330 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 STARD8Q92502 1023 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 ASB9Q96DX5 294 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 SLC38A2Q96QD8 506 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 GBA3Q9H227 469 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 IFI27L2Q9H2X8 130 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 YY1AP1Q9H869 796 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 GIN1Q9NXP7 522 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 BFARQ9NZS9 450 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 PCYOX1Q9UHG3 505 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 PTBP2Q9UKA9 531 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 MMP17Q9ULZ9 603 aa2.7□□□□□ -1.98
SMCHD1-204ENST00000581226 ARID1AO14497 2285 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 IGKV6-21A0A0C4DH24 114 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 CCDC182A6NF36 153 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 MAGEB3O15480 346 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 PRKAB2O43741 272 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 ALDOBP05062 364 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 CXCL5P42830 114 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 CRYBB1P53674 252 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 ACVR1Q04771 509 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 NCBP1Q09161 790 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 SMARCB1Q12824 385 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 RSPO1Q2MKA7 263 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 KLHL38Q2WGJ6 581 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 DEFB116Q30KQ4 102 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 CFAP157Q5JU67 520 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 LCN12Q6JVE5 192 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 LRRC31Q6UY01 552 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 PPP1R42Q7Z4L9 355 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 ECHDC2Q86YB7 292 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 TBC1D21Q8IYX1 336 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 STEAP2Q8NFT2 490 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 OR2G3Q8NGZ4 309 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 TAAR1Q96RJ0 339 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 LHX9Q9NQ69 397 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 POLE4Q9NR33 117 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 NECAP2Q9NVZ3 263 aa2.69□□□□□ -1.98
SMCHD1-204ENST00000581226 IGLV4-60A0A075B6I1 120 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 IGLV11-55A0A075B6I3 123 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 PPIAL4EA0A075B759 164 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 OR5B21A6NL26 309 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 PEX7O00628 323 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 CPLX1O14810 134 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 RHOBTB1O94844 696 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 PPIAL4FP0DN26 164 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 GRIA1P42261 906 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 IFNAR2P48551 515 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 MNAT1P51948 309 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 ERVK-25P63136 954 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 SLAQ13239 276 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 CCDC152Q4G0S7 254 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 FILIP1LQ4L180 1135 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 ATAD3BQ5T9A4 648 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 MAGEE2Q8TD90 523 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 FGF14Q92915 247 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 ECSITQ9BQ95 431 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 DNTTIP1Q9H147 329 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 GORASP2Q9H8Y8 452 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 CALYQ9NYX4 217 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 KCNIP3Q9Y2W7 256 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 DDX49Q9Y6V7 483 aaKnown RBP2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 ATP10AO60312 1499 aa2.68□□□□□ -1.98
SMCHD1-204ENST00000581226 AIREO43918 545 aa2.67□□□□□ -1.98
SMCHD1-204ENST00000581226 GMFGO60234 142 aa2.67□□□□□ -1.98
SMCHD1-204ENST00000581226 TOM1O60784 492 aa2.67□□□□□ -1.98
SMCHD1-204ENST00000581226 GKN3PP0CG01 181 aa2.67□□□□□ -1.98
SMCHD1-204ENST00000581226 NCK1P16333 377 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms