RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 LGALS3BPQ08380 585 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 GABRA6Q16445 453 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 CARD17Q5XLA6 110 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 SLC22A25Q6T423 547 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 HACD2Q6Y1H2 254 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 HIST3H2AQ7L7L0 130 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 SLC15A3Q8IY34 581 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 ZIC4Q8N9L1 334 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 PIK3C3Q8NEB9 887 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 OR5J2Q8NH18 312 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 HIST1H2ACQ93077 130 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 PERPQ96FX8 193 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 MOGAT1Q96PD6 335 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 POLR2J2Q9GZM3 115 aaKnown RBP9.58□□□□□ -0.88
NDEL1-208ENST00000580237 PCDHAC1Q9H158 963 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 POLR2J3Q9H1A7 115 aaKnown RBP9.58□□□□□ -0.88
NDEL1-208ENST00000580237 CXXC4Q9H2H0 198 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 CXorf56Q9H5V9 222 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 SPAG4Q9NPE6 437 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 B3GAT2Q9NPZ5 323 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 NANSQ9NR45 359 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 SLC17A5Q9NRA2 495 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 MRPL39Q9NYK5 338 aaKnown RBP9.58□□□□□ -0.88
NDEL1-208ENST00000580237 ADA2Q9NZK5 511 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 NPAP1Q9NZP6 1156 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 B3GAT1Q9P2W7 334 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 NOX1Q9Y5S8 564 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 CSMD1Q96PZ7 3565 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 ALPK2Q86TB3 2170 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 TEP1Q99973 2627 aaKnown RBP9.57□□□□□ -0.88
NDEL1-208ENST00000580237 PDLIM1O00151 329 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 ARHGEF9O43307 516 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 TRAF3IP2O43734 574 aaPredicted RBP9.57□□□□□ -0.88
NDEL1-208ENST00000580237 UPK3AO75631 287 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 DCTN3O75935 186 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 OR5F1O95221 314 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 IFNW1P05000 195 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 PTAFRP25105 342 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 GSK3BP49841 420 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 PSME3P61289 254 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 MXRA7P84157 204 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 ZNF74Q16587 644 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 HIKESHIQ53FT3 197 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 Q5PR19 223 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 SEZ6L2Q6UXD5 910 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 WDR88Q6ZMY6 472 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 FKBP9P1Q75LS8 142 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 DEPDC4Q8N2C3 294 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 ZNF611Q8N823 705 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 OR6N1Q8NGY5 312 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 GEMIN6Q8WXD5 167 aaKnown RBP9.57□□□□□ -0.88
NDEL1-208ENST00000580237 GTPBP3Q969Y2 492 aaKnown RBP9.57□□□□□ -0.88
NDEL1-208ENST00000580237 PRRC1Q96M27 445 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 MUS81Q96NY9 551 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 LRRC37BQ96QE4 947 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 PIP5K1AQ99755 562 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 KCNS3Q9BQ31 491 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 TMEM204Q9BSN7 226 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 C1QTNF6Q9BXI9 259 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 LINC00470Q9BZP3 86 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 SLC19A3Q9BZV2 496 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 AMBRA1Q9C0C7 1298 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 MYLK2Q9H1R3 596 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 FKRPQ9H9S5 495 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 FAIMQ9NVQ4 179 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 MGAT4BQ9UQ53 548 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 ARL2BPQ9Y2Y0 163 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 SLC25A15Q9Y619 301 aa9.57□□□□□ -0.88
NDEL1-208ENST00000580237 ITPR3Q14573 2671 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 DPRXA6NFQ7 191 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 ZNF726A6NNF4 738 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 M0R3G1 203 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 RNF13O43567 381 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 FZD7O75084 574 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 HPRP00739 348 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 RBM34P42696 430 aaKnown RBP9.56□□□□□ -0.88
NDEL1-208ENST00000580237 CAPZA2P47755 286 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 RPS4XP62701 263 aaKnown RBP9.56□□□□□ -0.88
NDEL1-208ENST00000580237 SELENOWP63302 87 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 NKX6-1P78426 367 aaPredicted RBP9.56□□□□□ -0.88
NDEL1-208ENST00000580237 SPOCK1Q08629 439 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 PIN1Q13526 163 aaPredicted RBP9.56□□□□□ -0.88
NDEL1-208ENST00000580237 TBRG1Q3YBR2 411 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 IFI44LQ53G44 452 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 TGIF2LYQ8IUE0 185 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 ANKK1Q8NFD2 765 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 OR1K1Q8NGR3 316 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 TMEM255BQ8WV15 326 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 RADILQ96JH8 1075 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 HSH2DQ96JZ2 352 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 OR2M2Q96R28 347 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 EMC6Q9BV81 110 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 ULBP2Q9BZM5 246 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 CRLF2Q9HC73 371 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 OBP2BQ9NPH6 170 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 MED29Q9NX70 200 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 GMPR2Q9P2T1 348 aaKnown RBP9.56□□□□□ -0.88
NDEL1-208ENST00000580237 RIMS3Q9UJD0 308 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 ZNF229Q9UJW7 825 aa9.56□□□□□ -0.88
NDEL1-208ENST00000580237 LAMP3Q9UQV4 416 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms