RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 RAD1O60671 282 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 APOL3O95236 402 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 PPP1R3DO95685 299 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 HLA-DQB1P01920 261 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 GALP22466 123 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 TCEA1P23193 301 aaKnown RBP18.35■□□□□ 0.53
SMG8-203ENST00000578922 CFL1P23528 166 aaKnown RBP18.35■□□□□ 0.53
SMG8-203ENST00000578922 CDH11P55287 796 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 FABP5Q01469 135 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 Q0VFX4 171 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 TAB1Q15750 504 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 NTRK2Q16620 822 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 PYDC2Q56P42 97 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 PRAMEF20Q5VT98 475 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 AADACL4Q5VUY2 407 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 MISPQ8IVT2 679 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 MOGAT1Q96PD6 335 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 NPAS1Q99742 590 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 SOSTQ9BQB4 213 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 JAM3Q9BX67 310 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 VDAC3Q9Y277 283 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 EXOGQ9Y2C4 368 aaKnown RBP18.35■□□□□ 0.53
SMG8-203ENST00000578922 AKAP8O43823 692 aaKnown RBP18.34■□□□□ 0.53
SMG8-203ENST00000578922 HLA-DPB1P04440 258 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 LCN1P1Q5VSP4 162 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 BBS1Q8NFJ9 593 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 OR52N1Q8NH53 320 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 C11orf54Q9H0W9 315 aaPredicted RBP18.34■□□□□ 0.53
SMG8-203ENST00000578922 P4HTMQ9NXG6 502 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 PPP4R1LQ9P1A2 415 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 OR7A10O76100 309 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 DKK1O94907 266 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 PTGDSP41222 190 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 GABREP78334 506 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 ZNF791Q3KP31 576 aaPredicted RBP18.34■□□□□ 0.53
SMG8-203ENST00000578922 TBRG1Q3YBR2 411 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 C1QL3Q5VWW1 255 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 RPL13AP3Q6NVV1 102 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 ARSKQ6UWY0 536 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 RPS19BP1Q86WX3 136 aaKnown RBP18.34■□□□□ 0.53
SMG8-203ENST00000578922 SIRT6Q8N6T7 355 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 NACC2Q96BF6 587 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 FRMD6Q96NE9 622 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 TM9SF2Q99805 663 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 TMEM43Q9BTV4 400 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 SLC19A3Q9BZV2 496 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 MED20Q9H944 212 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 ASB6Q9NWX5 421 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 POLHQ9Y253 713 aa18.34■□□□□ 0.53
SMG8-203ENST00000578922 YARS2Q9Y2Z4 477 aaKnown RBP18.34■□□□□ 0.53
SMG8-203ENST00000578922 PCSK5Q92824 1860 aa18.33■□□□□ 0.53
SMG8-203ENST00000578922 ZC3H12DA2A288 527 aaKnown RBP18.33■□□□□ 0.52
SMG8-203ENST00000578922 CASKO14936 926 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 HMGN1P05114 100 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 RTL4Q6ZR62 310 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 CPOQ8IVL8 374 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 KLHL36Q8N4N3 616 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 PSD4Q8NDX1 1056 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 SLC7A6Q92536 515 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 RNF121Q9H920 327 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 ANKRD10Q9NXR5 420 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 PCDHGB7Q9Y5F8 929 aa18.33■□□□□ 0.52
SMG8-203ENST00000578922 TMED7-TICAM2A0A0A6YYA0 188 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 CENPBD1B2RD01 187 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 SHISA8B8ZZ34 492 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 STMND1H3BQB6 276 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 IGHA1P01876 353 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 MYL9P24844 172 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 HTR1FP30939 366 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 MRPS15P82914 257 aaKnown RBP18.32■□□□□ 0.52
SMG8-203ENST00000578922 FOXK2Q01167 660 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 LTBQ06643 244 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 RIN1Q13671 783 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 B3GNTL1Q67FW5 361 aaPredicted RBP18.32■□□□□ 0.52
SMG8-203ENST00000578922 MZT2AQ6P582 158 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 LNX2Q8N448 690 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 ARIH2OSQ8N7S6 290 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 ZC3HAV1LQ96H79 300 aaKnown RBP18.32■□□□□ 0.52
SMG8-203ENST00000578922 CCNL2Q96S94 520 aaPredicted RBP18.32■□□□□ 0.52
SMG8-203ENST00000578922 HINT3Q9NQE9 182 aaKnown RBP18.32■□□□□ 0.52
SMG8-203ENST00000578922 IL17BQ9UHF5 180 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 TMED7Q9Y3B3 224 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 WIF1Q9Y5W5 379 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 A0A1W2PQ72 361 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 MCIDASD6RGH6 385 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 BLOC1S5-TXNDC5H3BN57 136 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 HLA-DMAP28067 261 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 NOS3P29474 1203 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 SLC6A6P31641 620 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 RPL4P36578 427 aaKnown RBP18.32■□□□□ 0.52
SMG8-203ENST00000578922 SSR4P51571 173 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 POLR2HP52434 150 aaKnown RBP18.32■□□□□ 0.52
SMG8-203ENST00000578922 CDK10Q15131 360 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 ZNF74Q16587 644 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 PLBD1Q6P4A8 553 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 SHFQ7M4L6 423 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 TMEM156Q8N614 296 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 ENKURQ8TC29 256 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 TAAR8Q969N4 342 aa18.32■□□□□ 0.52
SMG8-203ENST00000578922 MMP28Q9H239 520 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms