RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 GPA33Q99795 319 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 ZNF426Q9BUY5 554 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 OR52D1Q9H346 318 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 TP63Q9H3D4 680 aaPredicted RBP9.16□□□□□ -0.94
SS18-210ENST00000578700 DSN1Q9H410 356 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
SS18-210ENST00000578700 TAS2R10Q9NYW0 307 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 PPP4R1LQ9P1A2 415 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 RSL24D1Q9UHA3 163 aaKnown RBP9.16□□□□□ -0.94
SS18-210ENST00000578700 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.16□□□□□ -0.94
SS18-210ENST00000578700 ICAM5Q9UMF0 924 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 PLEKHA6Q9Y2H5 1048 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 ZNF337Q9Y3M9 751 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 PCDHGB1Q9Y5G3 927 aa9.16□□□□□ -0.94
SS18-210ENST00000578700 ZNF99A8MXY4 864 aaPredicted RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 GMFGO60234 142 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 ENTPD6O75354 484 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 ITGA10O75578 1167 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 NDUFB2O95178 105 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 TP53P04637 393 aaPredicted RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 CDK1P06493 297 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 PIPP12273 146 aaPredicted RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 GABRB1P18505 474 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 FUT1P19526 365 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 PTNP21246 168 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 RPL4P36578 427 aaKnown RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 ZNF41P51814 821 aaPredicted RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 NUDT6P53370 316 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 PRPS1P60891 318 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 PLGLB1Q02325 96 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 PMS2P3Q13401 168 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 SNTA1Q13424 505 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 RAB39AQ14964 217 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 TMEM201Q5SNT2 666 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 LAIR2Q6ISS4 152 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 SLC30A6Q6NXT4 461 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 ARHGAP11AQ6P4F7 1023 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 APOOLQ6UXV4 268 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 GRINAQ7Z429 371 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 MEX3DQ86XN8 651 aaKnown RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 CCDC103Q8IW40 242 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 TMEM156Q8N614 296 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 OR13C2Q8NGS9 318 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 OR51A7Q8NH64 312 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 ZNF420Q8TAQ5 688 aaPredicted RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 ST8SIA1Q92185 356 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 HGDQ93099 445 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 SPACA9Q96E40 222 aaPredicted RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 ARSGQ96EG1 525 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 LRR1Q96L50 414 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 RASL10BQ96S79 203 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 SECISBP2Q96T21 854 aaKnown RBP9.15□□□□□ -0.94
SS18-210ENST00000578700 PLA2G12AQ9BZM1 189 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 UBQLN3Q9H347 655 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 PTGES2Q9H7Z7 377 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 AMBNQ9NP70 447 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 C20orf141Q9NUB4 165 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 ALKBH4Q9NXW9 302 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 AASSQ9UDR5 926 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 ST6GALNAC2Q9UJ37 374 aa9.15□□□□□ -0.94
SS18-210ENST00000578700 TMEM200CA6NKL6 621 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 FAM166BA8MTA8 275 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 ZNF701M0R085 212 aaPredicted RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 M0R129 80 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 CDK2AP1O14519 115 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 CDC42EP2O14613 210 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 SURF4O15260 269 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 PRODHO43272 600 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 OIP5O43482 229 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 PRKYO43930 277 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 ADAM11O75078 769 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 TRMUO75648 421 aaKnown RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 OR7A10O76100 309 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 NTN1O95631 604 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 FADS2O95864 444 aaKnown RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 CH25HO95992 272 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 MT-ND2P03891 347 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 ZNF3P17036 446 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 MYL12AP19105 171 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 HK1P19367 917 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 DNASE1P24855 282 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 ATP6V1E1P36543 226 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 MAP2K6P52564 334 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 PPIAP62937 165 aaKnown RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 EMX1Q04741 257 aaPredicted RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 PIGFQ07326 219 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 ST3GAL4Q11206 333 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 C1DQ13901 141 aaKnown RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 QPRTQ15274 297 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 NTRK2Q16620 822 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 GXYLT1Q4G148 440 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 LCE2DQ5TA82 110 aaPredicted RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 ACSM5Q6NUN0 579 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 C16orf47Q6ZP98 133 aaPredicted RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 MDGA2Q7Z553 956 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 NANOGNBQ7Z5D8 188 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 CLVS1Q8IUQ0 354 aaPredicted RBP9.14□□□□□ -0.95
SS18-210ENST00000578700 GID4Q8IVV7 300 aa9.14□□□□□ -0.95
SS18-210ENST00000578700 OR8D4Q8NGM9 314 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms