RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RAP2CQ9Y3L5 183 aa5.46□□□□□ -1.54
NUP88-212ENST00000576708 NUP214P35658 2090 aaPredicted RBP5.46□□□□□ -1.54
NUP88-212ENST00000576708 FBN1P35555 2871 aaKnown RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 IGKV3D-15A0A087WSY6 115 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 TMED7-TICAM2A0A0A6YYA0 188 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 GOLGA8QA0A0J9YX86 632 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 PRSS51A0A1B0GVH4 220 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 TMEM72A0PK05 275 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 GOLGA8OA6NCC3 632 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 OR5H1A6NKK0 313 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 CCT8L1PA6NM43 557 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 GOLGA8NF8WBI6 632 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 BOLA2-SMG1P6H3BVE0 249 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 M0R1B8 84 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 HMGN4O00479 90 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 TMCC2O75069 709 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 LY6HO94772 140 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 SNUPNO95149 360 aaKnown RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 AK1P00568 194 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 CHRM4P08173 479 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 ITGA5P08648 1049 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 ALDOCP09972 364 aaKnown RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 MYZAPP0CAP1 466 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 IL12AP29459 219 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 S100A3P33764 101 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 CHI3L1P36222 383 aaPredicted RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 APOBEC1P41238 236 aaKnown RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 SLC1A6P48664 564 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 RPL14P50914 215 aaKnown RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 CSNK2A1P68400 391 aaPredicted RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 KCNJ10P78508 379 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 SLC25A3Q00325 362 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 MAD2L1Q13257 205 aaPredicted RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 KRT71Q3SY84 523 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 FAM174BQ3ZCQ3 159 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 GAGE13Q4V321 117 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 TIMM23BQ5SRD1 257 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 ATAD3BQ5T9A4 648 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 FBXW9Q5XUX1 488 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 DNM1P46Q6ZS02 220 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 GRINAQ7Z429 371 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 CMTM4Q8IZR5 234 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 ARFGAP2Q8N6H7 521 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 WDR31Q8NA23 367 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 FAM71CQ8NEG0 241 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 OR8J2Q8NGG1 315 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 PNPT1Q8TCS8 783 aaKnown RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 MIPOL1Q8TD10 442 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 NRG4Q8WWG1 115 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 APH1AQ96BI3 265 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 ARL8AQ96BM9 186 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 NEURL3Q96EH8 262 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 HS6ST2Q96MM7 605 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 SLC35A5Q9BS91 424 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 ADI1Q9BV57 179 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 TMEM109Q9BVC6 243 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 CACNG6Q9BXT2 260 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 SLC38A1Q9H2H9 487 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 CENPHQ9H3R5 247 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 WDR55Q9H6Y2 383 aaPredicted RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.45□□□□□ -1.54
NUP88-212ENST00000576708 SLC6A13Q9NSD5 602 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 RLIMQ9NVW2 624 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 ZIM2Q9NZV7 527 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 CHRNA9Q9UGM1 479 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 SCOCQ9UIL1 159 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 OSGIN1Q9UJX0 560 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 TMED7Q9Y3B3 224 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 SPEF1Q9Y4P9 236 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 SLC25A15Q9Y619 301 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 CR1P17927 2039 aa5.45□□□□□ -1.54
NUP88-212ENST00000576708 FAM234BA2RU67 622 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 CCDC154A6NI56 674 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 SDHDO14521 159 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 KLF11O14901 512 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 RGS16O15492 202 aaPredicted RBP5.44□□□□□ -1.54
NUP88-212ENST00000576708 MRPL33O75394 65 aaKnown RBP5.44□□□□□ -1.54
NUP88-212ENST00000576708 PMS2P2O95744 297 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 GKN3PP0CG01 181 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 DHRS4L1P0CG22 281 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 LBPP18428 481 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 CDH2P19022 906 aaPredicted RBP5.44□□□□□ -1.54
NUP88-212ENST00000576708 TACR3P29371 465 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 TTKP33981 857 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 MSX2P35548 267 aaPredicted RBP5.44□□□□□ -1.54
NUP88-212ENST00000576708 KHKP50053 298 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 FABP6P51161 128 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 LGALS3BPQ08380 585 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 BST1Q10588 318 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 BNIP2Q12982 314 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 STX3Q13277 289 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 TMED1Q13445 227 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 ICAM4Q14773 271 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 PDK3Q15120 406 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 MAPK11Q15759 364 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 GABRA6Q16445 453 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 SMU1Q2TAY7 513 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 TSPO2Q5TGU0 170 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 ANXA8L1Q5VT79 327 aa5.44□□□□□ -1.54
NUP88-212ENST00000576708 C11orf71Q6IPW1 123 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms