RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DCTDP32321 178 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 CSNK1G2P78368 415 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 IRF3Q14653 427 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 CST6Q15828 149 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 SGCAQ16586 387 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF836Q6ZNA1 936 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 GFOD1Q9NXC2 390 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 A4GNTQ9UNA3 340 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 UBE2J1Q9Y385 318 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 LINC00862A6NCI5 91 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 TRIM64BA6NI03 449 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 SELENOFO60613 162 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 EMP2P54851 167 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 PLA2G7Q13093 441 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 EBPQ15125 230 aaKnown RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 AADACL4Q5VUY2 407 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 ABHD17CQ6PCB6 329 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR51T1Q8NGJ9 327 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC52A3Q9NQ40 469 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 CCL27Q9Y4X3 112 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 A0A1W2PS29 197 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM200CA6NKL6 621 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 KDM4EB2RXH2 506 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 RRASP10301 218 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR10K2Q6IF99 312 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 ACOT7LQ6ZUV0 252 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 KLHDC8BQ8IXV7 354 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZC3HAV1LQ96H79 300 aaKnown RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 K7EPK0 472 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ERVH48-1M5A8F1 160 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC34A2O95436 690 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 HOXB2P14652 356 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC35D2Q76EJ3 337 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM71E2Q8N5Q1 922 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 SMIM19Q96E16 107 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC17A9Q9BYT1 436 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 GLI3P10071 1580 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 MYO9BQ13459 2157 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR5H14A6NHG9 310 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 UBL4AP11441 157 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 MGMTP16455 207 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF41P51814 821 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ARF3P61204 181 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ARF1P84077 181 aaKnown RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 CDK5Q00535 292 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 CDK5R1Q15078 307 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 LINC00303Q3SY05 128 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 DPY19L2P2Q6ZN68 376 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 COX15Q7KZN9 410 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR5D14Q8NGL3 314 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ASB17Q8WXJ9 295 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 SORCS2Q96PQ0 1159 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 TCEAL2Q9H3H9 227 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM212BQ9NTI7 297 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 INSL6Q9Y581 213 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 KCNE1BA0A087WTH5 132 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 LOC100289279A0A1B0GTE1 492 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM269A0A1B0GVZ9 245 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 H7C1C5 153 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 IFNA1P01562 189 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 LCN6P62502 163 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 GLYR1Q49A26 553 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF765Q7L2R6 523 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR4K15Q8NH41 348 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 WBP2Q969T9 261 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 GIMAP5Q96F15 307 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 SSX3Q99909 188 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 SGPP1Q9BX95 441 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF175Q9Y473 711 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 PUS1Q9Y606 427 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 RNF215Q9Y6U7 377 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 TTC3P53804 2025 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 FCMRO60667 390 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 WISP3O95389 354 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 CD22P20273 847 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC26A5P58743 744 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 GSG1Q2KHT4 349 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR52B4Q8NGK2 314 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 TSACCQ96A04 125 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 WDR89Q96FK6 387 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 DERL3Q96Q80 235 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 MARCH5Q9NX47 278 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 LRFN1Q9P244 771 aa12.11□□□□□ -0.47
PCDHGB3-201ENST00000576222 BTAF1O14981 1849 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 AFF3P51826 1226 aaKnown RBP12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 DEFB110Q30KQ9 67 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 CDONQ4KMG0 1287 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 GPR157Q5UAW9 335 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 LIPNQ5VXI9 398 aa12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCDHGB3-201ENST00000576222 Q6ZTK2 550 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms