RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 HLA-DQB1P01920 261 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 APOA1P02647 267 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TFP02787 698 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 HEXBP07686 556 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 HNRNPCP07910 306 aaKnown RBP eCLIP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TACSTD2P09758 323 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CLUP10909 449 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF19P17023 458 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 PTNP21246 168 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 APEX1P27695 318 aaKnown RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 GTF2E2P29084 291 aaKnown RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SDHAP31040 664 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CD97P48960 835 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 DUSP3P51452 185 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 POLR2HP52434 150 aaKnown RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 BLVRAP53004 296 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 EMP2P54851 167 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CTXN1P60606 82 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 RPS7P62081 194 aaKnown RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ERVK-25P63136 954 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 E2F1Q01094 437 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF117Q03924 483 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 MXD1Q05195 221 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZFP36L1Q07352 338 aaKnown RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SCN1BQ07699 218 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 C17orf67Q0P5P2 114 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 PLCXD2Q0VAA5 305 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZP4Q12836 540 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ASAH1Q13510 395 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TRA2AQ13595 282 aaKnown RBP eCLIP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 DNASE1L3Q13609 305 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CBFBQ13951 182 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF79Q15937 498 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF528Q3MIS6 628 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ACSM3Q53FZ2 586 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ALG10Q5BKT4 473 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SLC25A53Q5H9E4 307 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 EEF1A1P5Q5VTE0 462 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SLC6A19Q695T7 634 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 FCRLBQ6BAA4 426 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 GUSBP11Q6P575 273 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CCBE1Q6UXH8 406 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 DBX2Q6ZNG2 339 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SLC16A9Q7RTY1 509 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 MAMDC2Q7Z304 686 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 GRINAQ7Z429 371 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CEACAM19Q7Z692 300 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ANKRD37Q7Z713 158 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 LAX1Q8IWV1 398 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SLC35F2Q8IXU6 374 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CADM3Q8N126 398 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZFP41Q8N8Y5 198 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SYT14Q8NB59 555 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 APCDD1LQ8NCL9 501 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 IL17RDQ8NFM7 739 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 OR5L2Q8NGL0 311 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF563Q8TA94 476 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 DUSP19Q8WTR2 217 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZNRF4Q8WWF5 429 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 METTL21AQ8WXB1 218 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TMEM234Q8WY98 164 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ST8SIA1Q92185 356 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 HGDQ93099 445 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TMCO6Q96DC7 493 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZMYND19Q96E35 227 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 KTI12Q96EK9 354 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 PELI1Q96FA3 418 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 DIRAS2Q96HU8 199 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TXNDC15Q96J42 360 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 C4orf36Q96KX1 117 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 PGLYRP3Q96LB9 341 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 Q96M85 177 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CMTM3Q96MX0 182 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 MOGAT1Q96PD6 335 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 OR6C1Q96RD1 312 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 DCLRE1CQ96SD1 692 aaKnown RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 NMNAT3Q96T66 252 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 LPAR4Q99677 370 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CTRCQ99895 268 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 WDR77Q9BQA1 342 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ALG12Q9BV10 488 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TMED9Q9BVK6 235 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TBL1XR1Q9BZK7 514 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 RNF32Q9H0A6 362 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 PPIL3Q9H2H8 161 aaKnown RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 WDR54Q9H977 334 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TAS2R5Q9NYW4 299 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CTSFQ9UBX1 484 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ADAM30Q9UKF2 790 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ATXN7L1Q9ULK2 861 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TMED7Q9Y3B3 224 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ADAM18Q9Y3Q7 739 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SCN2AQ99250 2005 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SPTBP11277 2137 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 LAMA1P25391 3075 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TECTAO75443 2155 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 LOC102723996A0A087X1L8 192 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 A0A0G2JK05 382 aa4.87□□□□□ -1.63
SF3B3-213ENST00000569687 ANKUB1A6NFN9 424 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms