RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 Q96MF0 132 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 ZNF426Q9BUY5 554 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 TRAF4Q9BUZ4 470 aaPredicted RBP25.72■■□□□ 1.71
RAB40C-211ENST00000568586 GID8Q9NWU2 228 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 CAPN7Q9Y6W3 813 aa25.72■■□□□ 1.71
RAB40C-211ENST00000568586 ALPK2Q86TB3 2170 aa25.71■■□□□ 1.71
RAB40C-211ENST00000568586 KRT33AO76009 404 aa25.71■■□□□ 1.71
RAB40C-211ENST00000568586 HPRP00739 348 aa25.71■■□□□ 1.71
RAB40C-211ENST00000568586 SH3BGRP55822 239 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-211ENST00000568586 TMEM123Q8N131 208 aa25.71■■□□□ 1.71
RAB40C-211ENST00000568586 ADAMTS16Q8TE57 1224 aa25.71■■□□□ 1.71
RAB40C-211ENST00000568586 MOGAT1Q96PD6 335 aa25.71■■□□□ 1.71
RAB40C-211ENST00000568586 ALKBH3Q96Q83 286 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-211ENST00000568586 BDH2Q9BUT1 245 aa25.71■■□□□ 1.71
RAB40C-211ENST00000568586 GSX1Q9H4S2 264 aaPredicted RBP25.71■■□□□ 1.71
RAB40C-211ENST00000568586 FAIMQ9NVQ4 179 aa25.71■■□□□ 1.71
RAB40C-211ENST00000568586 E7EQL1 145 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 WNT11O96014 354 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 MT-ATP6P00846 226 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 HOXB1P14653 301 aaPredicted RBP25.7■■□□□ 1.7
RAB40C-211ENST00000568586 ATP5J2P56134 94 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 C1DQ13901 141 aaKnown RBP25.7■■□□□ 1.7
RAB40C-211ENST00000568586 TBRG1Q3YBR2 411 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 HIKESHIQ53FT3 197 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 WDR88Q6ZMY6 472 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 RNF217Q8TC41 542 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 MPP4Q96JB8 637 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 OR2M2Q96R28 347 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 ASPNQ9BXN1 380 aa25.7■■□□□ 1.7
RAB40C-211ENST00000568586 ARPC4-TTLL3A0A0A6YYG9 625 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 TRAPPC13A5PLN9 417 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 M0R1B8 84 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 SLC43A1O75387 559 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 SPOCK1Q08629 439 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 SLC22A25Q6T423 547 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 PIAS4Q8N2W9 510 aaPredicted RBP25.69■■□□□ 1.7
RAB40C-211ENST00000568586 RP9Q8TA86 221 aaKnown RBP25.69■■□□□ 1.7
RAB40C-211ENST00000568586 SLC26A7Q8TE54 656 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 DHRS9Q9BPW9 319 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 C1QTNF6Q9BXI9 259 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 SLC19A3Q9BZV2 496 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 NELFAQ9H3P2 528 aa25.69■■□□□ 1.7
RAB40C-211ENST00000568586 CPSF4LA6NMK7 179 aaKnown RBP25.68■■□□□ 1.7
RAB40C-211ENST00000568586 PLPP3O14495 311 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 AKAP8O43823 692 aaKnown RBP25.68■■□□□ 1.7
RAB40C-211ENST00000568586 CBLP22681 906 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 ROR2Q01974 943 aaKnown RBP25.68■■□□□ 1.7
RAB40C-211ENST00000568586 ETFDHQ16134 617 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 ANKRD16Q6P6B7 361 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 KLHL24Q6TFL4 600 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 PXKQ7Z7A4 578 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 UEVLDQ8IX04 471 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 FAM169BQ8N8A8 192 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 VANGL1Q8TAA9 524 aaPredicted RBP25.68■■□□□ 1.7
RAB40C-211ENST00000568586 TRMT61AQ96FX7 289 aaKnown RBP25.68■■□□□ 1.7
RAB40C-211ENST00000568586 ARMCX1Q9P291 453 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 BAG5Q9UL15 447 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 NOX1Q9Y5S8 564 aa25.68■■□□□ 1.7
RAB40C-211ENST00000568586 HLA-DOBP13765 273 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 NQO1P15559 274 aaKnown RBP25.67■■□□□ 1.7
RAB40C-211ENST00000568586 CDH2P19022 906 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-211ENST00000568586 PUDPQ08623 228 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 C3orf36Q3SXR2 165 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 HMBOX1Q6NT76 420 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 DEPDC4Q8N2C3 294 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 CIARTQ8N365 385 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-211ENST00000568586 PIK3C3Q8NEB9 887 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 LRR1Q96L50 414 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 GPR35Q9HC97 309 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 CRNNQ9UBG3 495 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-211ENST00000568586 USP22Q9UPT9 525 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 TLN2Q9Y4G6 2542 aa25.67■■□□□ 1.7
RAB40C-211ENST00000568586 FAM220BPB1ANY3 271 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 LRRN3E7EW58 273 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 TTKP33981 857 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 PMS2P3Q13401 168 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 ZNF74Q16587 644 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 AGAP6Q5VW22 663 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 B3GLCTQ6Y288 498 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 PROX1Q92786 737 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 PRSS27Q9BQR3 290 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 POLR2J2Q9GZM3 115 aaKnown RBP25.66■■□□□ 1.7
RAB40C-211ENST00000568586 POLR2J3Q9H1A7 115 aaKnown RBP25.66■■□□□ 1.7
RAB40C-211ENST00000568586 MOV10Q9HCE1 1003 aaKnown RBP25.66■■□□□ 1.7
RAB40C-211ENST00000568586 AP3M1Q9Y2T2 418 aa25.66■■□□□ 1.7
RAB40C-211ENST00000568586 TRIM64A6NGJ6 449 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 TRIM64BA6NI03 449 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 H7C1Q1 480 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 CCDC22O60826 627 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 IFNA14P01570 189 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 C11orf71Q6IPW1 123 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 ZNF544Q6NX49 715 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 C20orf196Q8IYI0 205 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 GPR137CQ8N3F9 429 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 OR5J2Q8NH18 312 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 GTPBP3Q969Y2 492 aaKnown RBP25.65■■□□□ 1.7
RAB40C-211ENST00000568586 RCN3Q96D15 328 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 SMR3AQ99954 134 aa25.65■■□□□ 1.7
RAB40C-211ENST00000568586 HEATR1Q9H583 2144 aaKnown RBP25.65■■□□□ 1.7
RAB40C-211ENST00000568586 FKRPQ9H9S5 495 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms