RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CPEP16870 476 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 GADD45AP24522 165 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 PSMA1P25786 263 aaKnown RBP13.21□□□□□ -0.29
COMMD4-221ENST00000567935 SDHAP31040 664 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 ETV1P50549 477 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 SSR4P51571 173 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 SLC25A1P53007 311 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 TPBGQ13641 420 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 GGTLC2Q14390 218 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 SPCS2Q15005 226 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 TOMM34Q15785 309 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-221ENST00000567935 SGCBQ16585 318 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 C1orf140Q5VVS0 124 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 PPP1R32Q7Z5V6 425 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 RPS19BP1Q86WX3 136 aaKnown RBP13.21□□□□□ -0.29
COMMD4-221ENST00000567935 ADGRG3Q86Y34 549 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 GPALPP1Q8IXQ4 340 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 LRRC17Q8N6Y2 441 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 BBS1Q8NFJ9 593 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 OR10G3Q8NGC4 313 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 OR52E2Q8NGJ4 325 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 ASB15Q8WXK1 588 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 TAAR8Q969N4 342 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 MIB2Q96AX9 1013 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 ZHX1-C8orf76Q96EF9 292 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 KTI12Q96EK9 354 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-221ENST00000567935 FRMD6Q96NE9 622 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 MOGAT1Q96PD6 335 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 SNX18Q96RF0 628 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 TEAD3Q99594 435 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 KATNB1Q9BVA0 655 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 PTGES2Q9H7Z7 377 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 NDUFB11Q9NX14 153 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 A3GALT2U3KPV4 340 aa13.21□□□□□ -0.29
COMMD4-221ENST00000567935 ITPR3Q14573 2671 aa13.21□□□□□ -0.3
COMMD4-221ENST00000567935 A0A087WZY1 265 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 A1L4Q6 167 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 CCDC182A6NF36 153 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 FAM183AA6NL82 134 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 AKAP8O43823 692 aaKnown RBP13.2□□□□□ -0.3
COMMD4-221ENST00000567935 CLPXO76031 633 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 HIST1H1CP16403 213 aaKnown RBP13.2□□□□□ -0.3
COMMD4-221ENST00000567935 ADH6P28332 368 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 AQP2P41181 271 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 PTGDSP41222 190 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 EIF1P41567 113 aaKnown RBP13.2□□□□□ -0.3
COMMD4-221ENST00000567935 CASP3P42574 277 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 MLF1P58340 268 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 RPS7P62081 194 aaKnown RBP13.2□□□□□ -0.3
COMMD4-221ENST00000567935 DNASE1L3Q13609 305 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 PON3Q15166 354 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.2□□□□□ -0.3
COMMD4-221ENST00000567935 KLHL12Q53G59 568 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 TIPARPQ7Z3E1 657 aaKnown RBP13.2□□□□□ -0.3
COMMD4-221ENST00000567935 JAZF1Q86VZ6 243 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 ATCAYQ86WG3 371 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 RAB43Q86YS6 212 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 EGFL6Q8IUX8 553 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 SCAIQ8N9R8 606 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 NLGN4YQ8NFZ3 816 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-221ENST00000567935 OR5J2Q8NH18 312 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 MFSD8Q8NHS3 518 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 DYNC2LI1Q8TCX1 351 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 UFD1Q92890 307 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 KISS1RQ969F8 398 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-221ENST00000567935 DDIT4LQ96D03 193 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 SGCZQ96LD1 299 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 IP6K3Q96PC2 410 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 COQ7Q99807 217 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 POTEKPQ9BYX7 375 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 NMNAT2Q9BZQ4 307 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 ZNF160Q9HCG1 818 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 SERINC1Q9NRX5 453 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 ERVK13-1Q9NX77 482 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 MOKQ9UQ07 419 aa13.2□□□□□ -0.3
COMMD4-221ENST00000567935 TMEM72A0PK05 275 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 ANKRD33BA6NCL7 494 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 LRRN3E7EW58 273 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 BLOC1S5-TXNDC5H3BN57 136 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 FZD7O75084 574 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 TRIM3O75382 744 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-221ENST00000567935 AGFG2O95081 481 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 SERPINA7P05543 415 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 SBK2P0C263 348 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 LIPCP11150 499 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 COL8A1P27658 744 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 CD82P27701 267 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 SOX3P41225 446 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 RPS5P46782 204 aaKnown RBP13.19□□□□□ -0.3
COMMD4-221ENST00000567935 CTXN1P60606 82 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 VBP1P61758 197 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 LTBQ06643 244 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 RPL18Q07020 188 aaKnown RBP13.19□□□□□ -0.3
COMMD4-221ENST00000567935 GPR50Q13585 617 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 SSX1Q16384 188 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 H3F3CQ6NXT2 135 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 JMJD6Q6NYC1 403 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-221ENST00000567935 FAM122BQ7Z309 247 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 ADCK1Q86TW2 530 aa13.19□□□□□ -0.3
COMMD4-221ENST00000567935 PHC2Q8IXK0 858 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms