RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 LGALS9O00182 355 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 BCAS1O75363 584 aaPredicted RBP1.14□□□□□ -2.23
CDH1-211ENST00000567320 IGHV3-43DP0DP04 118 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 LGALS3P17931 250 aaKnown RBP1.14□□□□□ -2.23
CDH1-211ENST00000567320 PSMA2P25787 234 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 NAMPTP43490 491 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 ACVR1Q04771 509 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 MEF2CQ06413 473 aaPredicted RBP1.14□□□□□ -2.23
CDH1-211ENST00000567320 PDIA2Q13087 525 aaKnown RBP1.14□□□□□ -2.23
CDH1-211ENST00000567320 ZNF546Q86UE3 836 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 LRRC43Q8N309 656 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 BCORP1Q8N888 145 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 SPC24Q8NBT2 197 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 OR10A7Q8NGE5 316 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 OR4D9Q8NGE8 314 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 TM4SF18Q96CE8 201 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 CABS1Q96KC9 395 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 TESK2Q96S53 571 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 RUFY1Q96T51 708 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 CCT7Q99832 543 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 TIMM29Q9BSF4 260 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 LHX5Q9H2C1 402 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 ARGLU1Q9NWB6 273 aaPredicted RBP1.14□□□□□ -2.23
CDH1-211ENST00000567320 CDH9Q9ULB4 789 aa1.14□□□□□ -2.23
CDH1-211ENST00000567320 A0A1W2PRQ8 180 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 LOC110117498-PIK3R3F6TDL0 507 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 UBXN8O00124 270 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 SDHDO14521 159 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 KERAO60938 352 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 GABARAPO95166 117 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 MT-ATP6P00846 226 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 NPR2P20594 1047 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 COX5AP20674 150 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 HPCAL1P37235 193 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 TNFSF9P41273 254 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 SLC11A1P49279 550 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 AP3M2P53677 418 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 NUCB2P80303 420 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 SLC7A9P82251 487 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 CBX3Q13185 183 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 MXD4Q14582 209 aaPredicted RBP1.13□□□□□ -2.23
CDH1-211ENST00000567320 GINS1Q14691 196 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 NTM-AS1Q6ZSK4 140 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 ACOT1Q86TX2 421 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 GRAMD2AQ8IUY3 354 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 CCDC65Q8IXS2 484 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 NKAIN3Q8N8D7 197 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 CNNM3Q8NE01 707 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 GEMIN6Q8WXD5 167 aaKnown RBP1.13□□□□□ -2.23
CDH1-211ENST00000567320 ZSCAN5AQ9BUG6 496 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 CHAC1Q9BUX1 264 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 RBKSQ9H477 322 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 ECT2Q9H8V3 914 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.13□□□□□ -2.23
CDH1-211ENST00000567320 FETUBQ9UGM5 382 aa1.13□□□□□ -2.23
CDH1-211ENST00000567320 A0A1B0GW55 424 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 H0YHG0 523 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 DNASE2O00115 360 aaPredicted RBP1.12□□□□□ -2.23
CDH1-211ENST00000567320 H2BFMP0C1H6 154 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 DUX4L2P0CJ85 424 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 DUX4L3P0CJ86 424 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 DUX4L5P0CJ88 424 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 DUX4L6P0CJ89 424 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 DUX4L7P0CJ90 424 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 SMIM10L1P0DMW3 83 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 C1GALT1C1LP0DN25 315 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 TPSB2P20231 275 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 TBXA2RP21731 343 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 GSSP48637 474 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 CRISP1P54107 249 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 ZNF616Q08AN1 781 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 TPSAB1Q15661 275 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 OR2G6Q5TZ20 316 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 NIPAL3Q6P499 406 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 DUX4L9Q6RFH8 374 aaPredicted RBP1.12□□□□□ -2.23
CDH1-211ENST00000567320 STRADAQ7RTN6 431 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 MISPQ8IVT2 679 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 SMIM10Q96HG1 83 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 TSSK3Q96PN8 268 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 LINC00597Q9H2U6 94 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 POPDC2Q9HBU9 364 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 VAT1LQ9HCJ6 419 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 DUX4Q9UBX2 424 aa1.12□□□□□ -2.23
CDH1-211ENST00000567320 AK6Q9Y3D8 172 aaKnown RBP1.12□□□□□ -2.23
CDH1-211ENST00000567320 ZNF407Q9C0G0 2248 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 A0A1W2PNN7 141 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 DDX39AO00148 427 aaKnown RBP1.11□□□□□ -2.23
CDH1-211ENST00000567320 KMOO15229 486 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 CCNE2O96020 404 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 PCMT1P22061 227 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 SOX6P35712 828 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 NCBP2P52298 156 aaKnown RBP eCLIP1.11□□□□□ -2.23
CDH1-211ENST00000567320 PRRX1P54821 245 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 RPS14P62263 151 aaKnown RBP1.11□□□□□ -2.23
CDH1-211ENST00000567320 LOXL1Q08397 574 aaPredicted RBP1.11□□□□□ -2.23
CDH1-211ENST00000567320 TP53I3Q53FA7 332 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 TPGS2Q68CL5 300 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 OR52E8Q6IFG1 317 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 LINC00173Q6ZV60 143 aa1.11□□□□□ -2.23
CDH1-211ENST00000567320 MREGQ8N565 214 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms