RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 OR4K5Q8NGD3 323 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 OR2T29Q8NH02 315 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 OR52J3Q8NH60 311 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 ALPK1Q96QP1 1244 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 CHID1Q9BWS9 393 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 SLCO5A1Q9H2Y9 848 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 GALNT8Q9NY28 637 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 B3GAT1Q9P2W7 334 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 STX18Q9P2W9 335 aaKnown RBP10.8□□□□□ -0.68
SF3B3-208ENST00000567250 SEC14L4Q9UDX3 406 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 TRBV4-1A0A0J9YWV2 114 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 SH3PXD2BA1X283 911 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 EFCAB9A8MZ26 197 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 C11orf98E9PRG8 122 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 BLOC1S5-TXNDC5H3BN57 136 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 TNFRSF11BO00300 401 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 PLPP3O14495 311 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 GNGT2O14610 69 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 RNF13O43567 381 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 TRAF3IP2O43734 574 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-208ENST00000567250 OR10H3O60404 316 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 CD79BP40259 229 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 CLDN17P56750 224 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 ZP4Q12836 540 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 EXOC3L2Q2M3D2 409 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 FBXW9Q5XUX1 488 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 Q6ZT83 130 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 TMPRSS11FQ6ZWK6 438 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 AAED1Q7RTV5 226 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 NUFIP2Q7Z417 695 aaKnown RBP10.79□□□□□ -0.68
SF3B3-208ENST00000567250 OAFQ86UD1 273 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 LSRQ86X29 649 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-208ENST00000567250 C10orf67Q8IYJ2 551 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 UBE2J2Q8N2K1 259 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 ZNF610Q8N9Z0 462 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 POMGNT2Q8NAT1 580 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 ADAD1Q96M93 576 aaKnown RBP10.79□□□□□ -0.68
SF3B3-208ENST00000567250 CCM2LQ9NUG4 571 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-208ENST00000567250 UPB1Q9UBR1 384 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 MALT1Q9UDY8 824 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 HIF3AQ9Y2N7 669 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 SAMHD1Q9Y3Z3 626 aaKnown RBP10.79□□□□□ -0.68
SF3B3-208ENST00000567250 LYVE1Q9Y5Y7 322 aa10.79□□□□□ -0.68
SF3B3-208ENST00000567250 ADGRG4Q8IZF6 3080 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 A0A1W2PRG6 482 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 MCIDASD6RGH6 385 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 FKBP6O75344 327 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 DEAF1O75398 565 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 SERPINI2O75830 405 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 KRT33AO76009 404 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 FCGR1AP12314 374 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 NR2C1P13056 603 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 GPR4P46093 362 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 DAP3P51398 398 aaKnown RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 PRPS1P60891 318 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 RPS4XP62701 263 aaKnown RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 RPL18Q07020 188 aaKnown RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 P2RY6Q15077 328 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 ZSCAN26Q16670 478 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 ALG10Q5BKT4 473 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 NIPAL3Q6P499 406 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 ZNF474Q6S9Z5 364 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 KDM8Q8N371 416 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 LRRC17Q8N6Y2 441 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 ZNF775Q96BV0 537 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 FAM46AQ96IP4 442 aaKnown RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 ZNF385AQ96PM9 386 aaKnown RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
SF3B3-208ENST00000567250 FUZQ9BT04 418 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 INIPQ9NRY2 104 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 ASB6Q9NWX5 421 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 ICE1Q9Y2F5 2266 aa10.78□□□□□ -0.68
SF3B3-208ENST00000567250 TUBAL3A6NHL2 446 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 NPIPB13A6NJU9 1138 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 ZNF726A6NNF4 738 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 NPIPB4C9JG80 1138 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 MS4A18H0YCH9 400 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 SLC43A1O75387 559 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 E2F6O75461 281 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 CCNB2O95067 398 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 HPRP00739 348 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 TSPAN19P0C672 248 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 COX6B1P14854 86 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 PPP3CBP16298 524 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 IGFBP2P18065 325 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 PSMB1P20618 241 aaKnown RBP10.77□□□□□ -0.69
SF3B3-208ENST00000567250 MAKP20794 623 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 IL32P24001 234 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 FPR3P25089 353 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 OMPP47874 163 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 LIMS1P48059 325 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 ARHGDIAP52565 204 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 HMGA2P52926 109 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 SEC23BQ15437 767 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 MS4A18Q3C1V0 323 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 TBPL2Q6SJ96 375 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 MEX3BQ6ZN04 569 aaKnown RBP10.77□□□□□ -0.69
SF3B3-208ENST00000567250 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.77□□□□□ -0.69
SF3B3-208ENST00000567250 EPHX4Q8IUS5 362 aa10.77□□□□□ -0.69
SF3B3-208ENST00000567250 GABRG1Q8N1C3 465 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms