RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ZNF3P17036 446 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 TCEA1P23193 301 aaKnown RBP17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 TUBA4AP68366 448 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 SLC35A1P78382 337 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 BLMHQ13867 455 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 OR7A5Q15622 319 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 EMC4Q5J8M3 183 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 GPR139Q6DWJ6 353 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 TMPPEQ6ZT21 453 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 YRDCQ86U90 279 aaKnown RBP17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 SFXN2Q96NB2 322 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 OR5B2Q96R09 309 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 DUSP21Q9H596 190 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 CHST11Q9NPF2 352 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 FANCFQ9NPI8 374 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 TAS2R5Q9NYW4 299 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 AASSQ9UDR5 926 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 IER3IP1Q9Y5U9 82 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 KDM4EB2RXH2 506 aaPredicted RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 M0R082 166 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 M0R129 80 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 DNPH1O43598 174 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 SMNDC1O75940 238 aaKnown RBP eCLIP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 ADORA3P0DMS8 318 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 GNLYP22749 145 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 EEF1B2P24534 225 aaKnown RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 CTXN1P60606 82 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 APOFQ13790 326 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 ZNF239Q16600 458 aaKnown RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 HIST2H2BCQ6DN03 193 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 LSRQ86X29 649 aaPredicted RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 ZNF417Q8TAU3 575 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 RFKQ969G6 155 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 LRR1Q96L50 414 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 ZNF587Q96SQ5 575 aaPredicted RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 KATNB1Q9BVA0 655 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 ACKR4Q9NPB9 350 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 INIPQ9NRY2 104 aa17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 CNOT2Q9NZN8 540 aaKnown RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 H2AFY2Q9P0M6 372 aaPredicted RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 PLEKHB1Q9UF11 243 aaPredicted RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 RPL36Q9Y3U8 105 aaKnown RBP17.13■□□□□ 0.33
CSPG4P13-201ENST00000565545 EFCAB10A6NFE3 127 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 TRIM64CA6NLI5 447 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 CLCA1A8K7I4 914 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 SULT2B1O00204 365 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 PRODHO43272 600 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 SEC14L5O43304 696 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 XPNPEP2O43895 674 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 EIF1BO60739 113 aaKnown RBP17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 ENTPD6O75354 484 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 IGHMP01871 453 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 SMIM18P0DKX4 95 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 PAICSP22234 425 aaKnown RBP17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 SFTPDP35247 375 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 UQCRFS1P47985 274 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 GFRA1P56159 465 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 OR2B6P58173 313 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 PPIAP62937 165 aaKnown RBP17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 CSNK2A1P68400 391 aaPredicted RBP17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 SLC35A2P78381 396 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 TMED1Q13445 227 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 SMN1Q16637 294 aaKnown RBP17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 GXYLT1Q4G148 440 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 WIPI1Q5MNZ9 446 aaPredicted RBP17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 NXNL2Q5VZ03 156 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 GID4Q8IVV7 300 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 FAM109AQ8N4B1 249 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 TMEM251Q8N6I4 163 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 ZNF540Q8NDQ6 660 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 ANKK1Q8NFD2 765 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 CPT1CQ8TCG5 803 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 MYDGFQ969H8 173 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 KLHL15Q96M94 604 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 ZNF582Q96NG8 517 aaPredicted RBP17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 TMEM185BQ9H7F4 350 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 PSORS1C1Q9UIG5 152 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 RELNP78509 3460 aa17.12■□□□□ 0.33
CSPG4P13-201ENST00000565545 SPTBN1Q01082 2364 aaKnown RBP17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 RP1L1Q8IWN7 2480 aaPredicted RBP17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 USP9XQ93008 2570 aaPredicted RBP17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 IRGMA1A4Y4 181 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 NPIPB13A6NJU9 1138 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 NPIPB4C9JG80 1138 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 RNF13O43567 381 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 PDGFAP04085 211 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 PIPP12273 146 aaPredicted RBP17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 SDHAP31040 664 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 DIO1P49895 249 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 ERVK-25P63136 954 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 PUDPQ08623 228 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 SLC10A1Q14973 349 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 SLC35F1Q5T1Q4 408 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 AADACL4Q5VUY2 407 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 ZNF773Q6PK81 442 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 ESPNLQ6ZVH7 1005 aa17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 CXXC5Q7LFL8 322 aaKnown RBP17.11■□□□□ 0.33
CSPG4P13-201ENST00000565545 FAM122BQ7Z309 247 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms