RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 PLSCR4Q9NRQ2 329 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 MED29Q9NX70 200 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 COQ3Q9NZJ6 369 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 KLHL9Q9P2J3 617 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 ZNF629Q9UEG4 869 aaPredicted RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 ZNF229Q9UJW7 825 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 FAM32AQ9Y421 112 aaKnown RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 MAGED1Q9Y5V3 778 aaPredicted RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 DCHS2Q6V1P9 2916 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 A8MXE2 369 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 TNFRSF11BO00300 401 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 DVL2O14641 736 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 ZNF432O94892 652 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 MT-ATP6P00846 226 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 IGF2P01344 180 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 F13BP05160 661 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 ADORA3P0DMS8 318 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 CD8BP10966 210 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 UMPSP11172 480 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 ITGA2P17301 1181 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 OR3A2P47893 321 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 ASCL1P50553 236 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 HMGA2P52926 109 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 CLDN17P56750 224 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 ACTR3P61158 418 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 RPS4XP62701 263 aaKnown RBP8.66□□□□□ -1.02
CLK3-208ENST00000562626 POU3F1Q03052 451 aaPredicted RBP8.66□□□□□ -1.02
CLK3-208ENST00000562626 MELKQ14680 651 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 POU4F3Q15319 338 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 TMEM201Q5SNT2 666 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 EEF1A1P5Q5VTE0 462 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 TMEM225Q6GV28 225 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 PGBD2Q6P3X8 592 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 THSD4Q6ZMP0 1018 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 TMPRSS11FQ6ZWK6 438 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 MAMDC2Q7Z304 686 aaPredicted RBP8.66□□□□□ -1.02
CLK3-208ENST00000562626 IGFN1Q86VF2 1251 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 SCAIQ8N9R8 606 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 ADPRHL1Q8NDY3 354 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 OR51A7Q8NH64 312 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 LIPHQ8WWY8 451 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 PYDC1Q8WXC3 89 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 DUS3LQ96G46 650 aaKnown RBP8.66□□□□□ -1.02
CLK3-208ENST00000562626 OXGR1Q96P68 337 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 TNFRSF13CQ96RJ3 184 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 ZNF347Q96SE7 839 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 EMC6Q9BV81 110 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 SF3B5Q9BWJ5 86 aaKnown RBP8.66□□□□□ -1.02
CLK3-208ENST00000562626 ASPNQ9BXN1 380 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 MCCC2Q9HCC0 563 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 GLRX2Q9NS18 164 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 GALNT8Q9NY28 637 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 C6orf203Q9P0P8 240 aaPredicted RBP8.66□□□□□ -1.02
CLK3-208ENST00000562626 PROCRQ9UNN8 238 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 B3GALT5Q9Y2C3 310 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 EMC9Q9Y3B6 208 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 CREBBPQ92793 2442 aa8.66□□□□□ -1.02
CLK3-208ENST00000562626 NOTCH2Q04721 2471 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 C2CD3Q4AC94 2353 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 CADP27708 2225 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 RTTNQ86VV8 2226 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 FBN2P35556 2912 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 EFCAB9A8MZ26 197 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 PRSS44E7EML9 344 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 BLOC1S5-TXNDC5H3BN57 136 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 MSTNO14793 375 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 ENTPD5O75356 428 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 PTP4A3O75365 173 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 UPK3AO75631 287 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 CIB2O75838 187 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 STAMBPO95630 424 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 CST1P01037 141 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 TP53P04637 393 aaPredicted RBP8.65□□□□□ -1.02
CLK3-208ENST00000562626 IGFBP1P08833 259 aaPredicted RBP8.65□□□□□ -1.02
CLK3-208ENST00000562626 IGFBP2P18065 325 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 AHCYP23526 432 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 GTF2E2P29084 291 aaKnown RBP8.65□□□□□ -1.02
CLK3-208ENST00000562626 RUNX1T1Q06455 604 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 PUDPQ08623 228 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 FAM27E3Q08E93 113 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 DBPQ10586 325 aaPredicted RBP8.65□□□□□ -1.02
CLK3-208ENST00000562626 ZP4Q12836 540 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 SLC25A35Q3KQZ1 300 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 FBXL19-AS1Q494R0 122 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 TSPO2Q5TGU0 170 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 CASP12Q6UXS9 341 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 NANOGNBQ7Z5D8 188 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 GALNT5Q7Z7M9 940 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 AMIGO2Q86SJ2 522 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 KIF18BQ86Y91 864 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 RNF113BQ8IZP6 322 aaKnown RBP8.65□□□□□ -1.02
CLK3-208ENST00000562626 TMEM123Q8N131 208 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 GABRG1Q8N1C3 465 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 ACBD4Q8NC06 268 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 LRTOMTQ8WZ04 291 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 TMEM45BQ96B21 275 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 ZNF837Q96EG3 531 aaPredicted RBP8.65□□□□□ -1.02
CLK3-208ENST00000562626 RSRC1Q96IZ7 334 aaKnown RBP8.65□□□□□ -1.02
CLK3-208ENST00000562626 KLHL4Q9C0H6 718 aa8.65□□□□□ -1.02
CLK3-208ENST00000562626 GP6Q9HCN6 339 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms