RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 FOPNLQ96NB1 174 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 SLC38A2Q96QD8 506 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 ERP44Q9BS26 406 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 GPR61Q9BZJ8 451 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 YY1AP1Q9H869 796 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 MRPL47Q9HD33 250 aaKnown RBP1.84□□□□□ -2.11
DENND4A-205ENST00000562540 DMAP1Q9NPF5 467 aaPredicted RBP1.84□□□□□ -2.11
DENND4A-205ENST00000562540 CYTL1Q9NRR1 136 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 GIN1Q9NXP7 522 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 ZNF226Q9NYT6 803 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 EPS15L1Q9UBC2 864 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 CLCF1Q9UBD9 225 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 KCNIP3Q9Y2W7 256 aa1.84□□□□□ -2.11
DENND4A-205ENST00000562540 RPAP1Q9BWH6 1393 aaPredicted RBP1.84□□□□□ -2.12
DENND4A-205ENST00000562540 IGKV2-28A0A075B6P5 120 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 OR5B21A6NL26 309 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 C11orf94C9JXX5 98 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TOM1O60784 492 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 SUPT3HO75486 399 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 MED6O75586 246 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 IGKV2D-28P01615 120 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 ALDOBP05062 364 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TDGF1P13385 188 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TBPP20226 339 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 GRIA1P42261 906 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 RPS9P46781 194 aaKnown RBP1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TFPI2P48307 235 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 IFNAR2P48551 515 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TDGF1P3P51864 188 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 LINC00315P59091 139 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 SPIBQ01892 262 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 CCDC152Q4G0S7 254 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 PDZK1Q5T2W1 519 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 C1orf94Q6P1W5 598 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 UTS2BQ765I0 119 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 NUDCD3Q8IVD9 361 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TEX9Q8N6V9 391 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 ZNF540Q8NDQ6 660 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 GMCL1P1Q8NEA9 526 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 OR2T3Q8NH03 318 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 KIR2DL5BQ8NHK3 375 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 MCOLN3Q8TDD5 553 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 STARD8Q92502 1023 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 ASB9Q96DX5 294 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 CEP170P1Q96L14 293 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 ZNF641Q96N77 438 aaPredicted RBP1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TSGA13Q96PP4 275 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TAAR1Q96RJ0 339 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 COPS8Q99627 209 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 ZSCAN5AQ9BUG6 496 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 RIOK2Q9BVS4 552 aaKnown RBP1.83□□□□□ -2.12
DENND4A-205ENST00000562540 SCRT1Q9BWW7 348 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 CDC42EP4Q9H3Q1 356 aaKnown RBP1.83□□□□□ -2.12
DENND4A-205ENST00000562540 RBAKQ9NYW8 714 aaPredicted RBP1.83□□□□□ -2.12
DENND4A-205ENST00000562540 PCYOX1Q9UHG3 505 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 TBX21Q9UL17 535 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 CDH9Q9ULB4 789 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 FANCIQ9NVI1 1328 aa1.83□□□□□ -2.12
DENND4A-205ENST00000562540 IGLV4-60A0A075B6I1 120 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 C15orf38-AP3S2A0A0A6YYH1 394 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 GOLGA8SH3BPF8 625 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 DLGAP1O14490 977 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 HSD17B6O14756 317 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 SLC31A2O15432 143 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 SS18L1O75177 396 aaPredicted RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 SPAG7O75391 227 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 MTX2O75431 263 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 ZNF324O75467 553 aaPredicted RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 CLDN9O95484 217 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 CSF3P09919 207 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 GKN3PP0CG01 181 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 CNR1P21554 472 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 BTCP35070 178 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 CXCL5P42830 114 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 SSR1P43307 286 aaKnown RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 GYG1P46976 350 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 CCT3P49368 545 aaKnown RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 UBE2AP49459 152 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 DUSP3P51452 185 aaPredicted RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 MNAT1P51948 309 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 CRISP3P54108 245 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 ATP1B3P54709 279 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 ERVK-25P63136 954 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 CDK16Q00536 496 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 REG3AQ06141 175 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 PDIA2Q13087 525 aaKnown RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 TAF7Q15545 349 aaPredicted RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 FILIP1LQ4L180 1135 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 COA6Q5JTJ3 125 aaKnown RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 OR4F3Q6IEY1 312 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 LCN12Q6JVE5 192 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 ZSCAN25Q6NSZ9 544 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 PMF1Q6P1K2 205 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 ECHDC2Q86YB7 292 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 H1FOOQ8IZA3 346 aaPredicted RBP1.82□□□□□ -2.12
DENND4A-205ENST00000562540 STEAP2Q8NFT2 490 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 SLC22A8Q8TCC7 542 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 PYROXD1Q8WU10 500 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 COQ2Q96H96 371 aa1.82□□□□□ -2.12
DENND4A-205ENST00000562540 OXGR1Q96P68 337 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms