RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 DUSP19Q8WTR2 217 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 WDR77Q9BQA1 342 aaPredicted RBP8.89□□□□□ -0.99
SMG1-205ENST00000561947 TTYH2Q9BSA4 534 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 TAS2R10Q9NYW0 307 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 ZNF346Q9UL40 294 aaKnown RBP8.89□□□□□ -0.99
SMG1-205ENST00000561947 CPAMD8Q8IZJ3 1885 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 TRBV2A0A0J9YWF9 115 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 H7C1C5 153 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 NPIPB7O75200 414 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 RENP00797 406 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 GRPRP30550 384 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 PSMB10P40306 273 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 OR10A3P58181 314 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 LCN6P62502 163 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 IL18Q14116 193 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 SGCBQ16585 318 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 COL28A1Q2UY09 1125 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 ZNF684Q5T5D7 378 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 PPP1R3BQ86XI6 285 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 ADGRG3Q86Y34 549 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 IL17RDQ8NFM7 739 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 OR2T4Q8NH00 348 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 IFI44Q8TCB0 444 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 CHAC2Q8WUX2 184 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 NEDD4LQ96PU5 975 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 TAS2R5Q9NYW4 299 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 MALT1Q9UDY8 824 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 MYO15AQ9UKN7 3530 aa8.89□□□□□ -0.99
SMG1-205ENST00000561947 TRBV11-1A0A0K0K1C0 115 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 LINC00854A0A1B0GVQ3 168 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 A8MVM7 634 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 PRR32B1ATL7 298 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 FAM25AB3EWG3 89 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 FAM25CB3EWG5 89 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 FAM25GB3EWG6 89 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 DCTN6O00399 190 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 LAMTOR5O43504 91 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 ZNF354AO60765 605 aaPredicted RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 GATBO75879 557 aaKnown RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 HLA-DQB1P01920 261 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 FBXW4P57775 412 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 RPS11P62280 158 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMG1-205ENST00000561947 P2RY14Q15391 338 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 FAM69AQ5T7M9 428 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 TIGD4Q8IY51 512 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 DEFB123Q8N688 67 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 RPS4Y2Q8TD47 263 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 THAP3Q8WTV1 239 aaPredicted RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 HGDQ93099 445 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 SLC25A36Q96CQ1 311 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 DNAJA3Q96EY1 480 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 UBL7Q96S82 380 aaPredicted RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 SLC22A4Q9H015 551 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 SRA1Q9HD15 236 aaKnown RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 APMAPQ9HDC9 416 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 SACM1LQ9NTJ5 587 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 RASD1Q9Y272 281 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 GPRIN2O60269 458 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 UCHL1P09936 223 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 SLC2A2P11168 524 aaPredicted RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 ELK1P19419 428 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 RAB3BP20337 219 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 HTR3AP46098 478 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 EIF2B2P49770 351 aaKnown RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 DAB2P98082 770 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 ZXDAP98168 799 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 CARTPTQ16568 116 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 PHF19Q5T6S3 580 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 EEF1A1P5Q5VTE0 462 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 C1orf140Q5VVS0 124 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 SLC6A19Q695T7 634 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 CPEB2Q7Z5Q1 589 aaKnown RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 LRRC28Q86X40 367 aaPredicted RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 OR6V1Q8N148 313 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 Q8N402 240 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 OR2I1PQ8NGU4 316 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 TMEM234Q8WY98 164 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 SPSB2Q99619 263 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 C11orf54Q9H0W9 315 aaPredicted RBP8.88□□□□□ -0.99
SMG1-205ENST00000561947 INIPQ9NRY2 104 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 OCIAD1Q9NX40 245 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 KLHDC2Q9Y2U9 406 aa8.88□□□□□ -0.99
SMG1-205ENST00000561947 ANKUB1A6NFN9 424 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 TMEM200CA6NKL6 621 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 C11orf98E9PRG8 122 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 ARL6IP5O75915 188 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 C17orf67Q0P5P2 114 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 SLC25A35Q3KQZ1 300 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 TRIQKQ629K1 86 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 LCN10Q6JVE6 187 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 C5orf46Q6UWT4 87 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 IL20RBQ6UXL0 311 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 UNQ9370/PRO34162Q6UXP9 181 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 KCTD20Q7Z5Y7 419 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 AKAP14Q86UN6 197 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 CDC20BQ86Y33 519 aa8.87□□□□□ -0.99
SMG1-205ENST00000561947 MAML2Q8IZL2 1156 aaPredicted RBP8.87□□□□□ -0.99
SMG1-205ENST00000561947 OR8K3Q8NH51 312 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms