RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CD80P33681 288 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ARR3P36575 388 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 CAPZA2P47755 286 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 SELENOVP59797 346 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 RPS23P62266 143 aaKnown RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 PAX8Q06710 450 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 BST1Q10588 318 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 MERTKQ12866 999 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 GTF2H2Q13888 395 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 HEPACAMQ14CZ8 416 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 HERPUD1Q15011 391 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 LARS2Q15031 903 aaKnown RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 NDUFAF6Q330K2 333 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 PCGF3Q3KNV8 242 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 SLC25A53Q5H9E4 307 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 TEX35Q5T0J7 233 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 RNASEH2BQ5TBB1 312 aaKnown RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 GTF2H2CQ6P1K8 395 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 PGBD2Q6P3X8 592 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 PAQR6Q6TCH4 344 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 LRIG3Q6UXM1 1119 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 Q6ZSV7 163 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 AAED1Q7RTV5 226 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 GOLGA7Q7Z5G4 137 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 VSTM4Q8IW00 320 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ZBED8Q8IZ13 594 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ZNF614Q8N883 585 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ZSCAN4Q8NAM6 433 aaPredicted RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 OR6Y1Q8NGX8 325 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 TBC1D15Q8TC07 691 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 MAGEE2Q8TD90 523 aaPredicted RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 SLC25A43Q8WUT9 341 aaPredicted RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 SNX33Q8WV41 574 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 MAIP1Q8WWC4 291 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ZNF524Q96C55 264 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ELP4Q96EB1 424 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ZNF317Q96PQ6 595 aaPredicted RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 ALKBH3Q96Q83 286 aaPredicted RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 LYSTQ99698 3801 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 PAIP2Q9BPZ3 127 aaKnown RBP4.45□□□□□ -1.7
HERC1-213ENST00000561359 PRDM13Q9H4Q3 707 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ELOVL6Q9H5J4 265 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 PALMDQ9NP74 551 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 TAAR3PQ9P1P4 343 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 OR5V1Q9UGF6 321 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 MYRFQ9Y2G1 1151 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 CACNG2Q9Y698 323 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 DOCK11Q5JSL3 2073 aa4.45□□□□□ -1.7
HERC1-213ENST00000561359 ZNF816-ZNF321PA0A0X1KG74 233 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 C17orf100A8MU93 164 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 DNPH1O43598 174 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 NKX2-2O95096 273 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 WISP3O95389 354 aaPredicted RBP4.44□□□□□ -1.7
HERC1-213ENST00000561359 TGDSO95455 350 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 FGGP02679 453 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 SBK2P0C263 348 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 NHLRC4P0CG21 123 aaPredicted RBP4.44□□□□□ -1.7
HERC1-213ENST00000561359 PPIAL4GP0DN37 164 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 PRPS2P11908 318 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 BCKDHAP12694 445 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 LYL1P12980 280 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 STMN1P16949 149 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 ZNF20P17024 532 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 ATP6V1C1P21283 382 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 TYK2P29597 1187 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 LCN1P31025 176 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 GLRXP35754 106 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 ASMTP46597 345 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 CCNG1P51959 295 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 PRKAG1P54619 331 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 SESN3P58005 492 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 GALK2Q01415 458 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 MGAT5Q09328 741 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 CBFBQ13951 182 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 SLC17A1Q14916 467 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 TSTQ16762 297 aaKnown RBP4.44□□□□□ -1.7
HERC1-213ENST00000561359 PFKFB4Q16877 469 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 TRMT5Q32P41 509 aaKnown RBP4.44□□□□□ -1.7
HERC1-213ENST00000561359 NSUN5P1Q3KNT7 163 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 ESCO2Q56NI9 601 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 CCNJQ5T5M9 372 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 GPR157Q5UAW9 335 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 DHRS7BQ6IAN0 325 aaPredicted RBP4.44□□□□□ -1.7
HERC1-213ENST00000561359 BTNL3Q6UXE8 466 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 SZRD1Q7Z422 152 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 ISCA2Q86U28 154 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 MDP1Q86V88 176 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 COX18Q8N8Q8 333 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 NAT8LQ8N9F0 302 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 CDRT4Q8N9R6 151 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 OR5W2Q8NH69 310 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 CDC26Q8NHZ8 85 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 MGARPQ8TDB4 240 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 SELENOMQ8WWX9 145 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 TMEM45BQ96B21 275 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 UPRTQ96BW1 309 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 ELMOD3Q96FG2 381 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 CHMP6Q96FZ7 201 aa4.44□□□□□ -1.7
HERC1-213ENST00000561359 NAA11Q9BSU3 229 aaPredicted RBP4.44□□□□□ -1.7
HERC1-213ENST00000561359 NMUR2Q9GZQ4 415 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms